RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 VDAC2P45880 294 aaPredicted RBP16.23■□□□□ 0.19
FOXA1-203ENST00000553751 HLA-DRB3P79483 266 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 EBI3Q14213 229 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 HES1Q14469 280 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 ABCA11PQ4W5N1 156 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 MOB3BQ86TA1 216 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 OR10R2Q8NGX6 335 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 IL1F10Q8WWZ1 152 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 RAB3CQ96E17 227 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 CMSS1Q9BQ75 279 aaKnown RBP16.23■□□□□ 0.19
FOXA1-203ENST00000553751 CENPOQ9BU64 300 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 Q9N2K0 584 aa16.23■□□□□ 0.19
FOXA1-203ENST00000553751 IGHV3-72A0A0B4J1Y9 119 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 SH2D7A6NKC9 451 aaPredicted RBP16.22■□□□□ 0.19
FOXA1-203ENST00000553751 M0QZ24 198 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 M0QZK8 103 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 TXNL1O43396 289 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 RGS11O94810 467 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 ARSJQ5FYB0 599 aaPredicted RBP16.22■□□□□ 0.19
FOXA1-203ENST00000553751 HIST2H2BDQ6DRA6 164 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 SFXN4Q6P4A7 337 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 TGIF2LXQ8IUE1 241 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 ODF3L1Q8IXM7 274 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 LYG1Q8N1E2 194 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 DAPK2Q9UIK4 370 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 MGAT4AQ9UM21 535 aa16.22■□□□□ 0.19
FOXA1-203ENST00000553751 MFNGO00587 321 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 CLEC2LP0C7M8 214 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 HNF4GQ14541 408 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 TREML4Q6UXN2 200 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 Q8N6K4 173 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 C11orf44Q8N8P7 122 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 OR2AK2Q8NG84 335 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 IFI27L2Q9H2X8 130 aa16.21■□□□□ 0.19
FOXA1-203ENST00000553751 METTL21EPA6NDL7 271 aa16.2■□□□□ 0.18
FOXA1-203ENST00000553751 ZNF736B4DX44 427 aaPredicted RBP16.2■□□□□ 0.18
FOXA1-203ENST00000553751 LANCL1O43813 399 aa16.2■□□□□ 0.18
FOXA1-203ENST00000553751 LPLP06858 475 aa16.2■□□□□ 0.18
FOXA1-203ENST00000553751 HIST1H1DP16402 221 aaKnown RBP16.2■□□□□ 0.18
FOXA1-203ENST00000553751 GNB3P16520 340 aa16.2■□□□□ 0.18
FOXA1-203ENST00000553751 MXD1Q05195 221 aa16.2■□□□□ 0.18
FOXA1-203ENST00000553751 C5orf56Q8N8D9 126 aa16.2■□□□□ 0.18
FOXA1-203ENST00000553751 EAF1Q96JC9 268 aaPredicted RBP16.2■□□□□ 0.18
FOXA1-203ENST00000553751 PARP12Q9H0J9 701 aaKnown RBP16.2■□□□□ 0.18
FOXA1-203ENST00000553751 VCX3AQ9NNX9 186 aa16.2■□□□□ 0.18
FOXA1-203ENST00000553751 TET2Q6N021 2002 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-203ENST00000553751 A0A075B6Q4 140 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 SAA2-SAA4A0A096LPE2 208 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 TRIM64CA6NLI5 447 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 FGF16O43320 207 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 SCTP09683 121 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 CD3GP09693 182 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 SAA2P0DJI9 122 aaPredicted RBP16.19■□□□□ 0.18
FOXA1-203ENST00000553751 SNRPBP14678 240 aaKnown RBP16.19■□□□□ 0.18
FOXA1-203ENST00000553751 CD1BP29016 333 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 LGALS14Q8TCE9 139 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 YIPF6Q96EC8 236 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 ATG5Q9H1Y0 275 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 OR1A1Q9P1Q5 309 aa16.19■□□□□ 0.18
FOXA1-203ENST00000553751 IGKV1-6A0A0C4DH72 117 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 SERPINE3A8MV23 424 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 ST8SIA5O15466 376 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 PEX14O75381 377 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 TSPAN15O95858 294 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 FCGR3AP08637 254 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 OR3A3P47888 321 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 C2orf68Q2NKX9 166 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 TIMM50Q3ZCQ8 353 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 ZNF833PQ6ZTB9 187 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 OR2T10Q8NGZ9 312 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 RBMXL1Q96E39 390 aaKnown RBP16.18■□□□□ 0.18
FOXA1-203ENST00000553751 MRPL20Q9BYC9 149 aaKnown RBP16.18■□□□□ 0.18
FOXA1-203ENST00000553751 SLC23A1Q9UHI7 598 aa16.18■□□□□ 0.18
FOXA1-203ENST00000553751 TRDCB7Z8K6 153 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 RRP9O43818 475 aaKnown RBP16.17■□□□□ 0.18
FOXA1-203ENST00000553751 FBXO24O75426 580 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 MOSP00540 346 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 CD28P10747 220 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 ZBTB25P24278 435 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 TGFBR1P36897 503 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 MRPS15P82914 257 aaKnown RBP16.17■□□□□ 0.18
FOXA1-203ENST00000553751 LSAMPQ13449 338 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 C9orf152Q5JTZ5 239 aa16.17■□□□□ 0.18
FOXA1-203ENST00000553751 ITGB1BP1O14713 200 aa16.16■□□□□ 0.18
FOXA1-203ENST00000553751 AIREO43918 545 aa16.16■□□□□ 0.18
FOXA1-203ENST00000553751 AGMATQ9BSE5 352 aa16.16■□□□□ 0.18
FOXA1-203ENST00000553751 MMP27Q9H306 513 aa16.16■□□□□ 0.18
FOXA1-203ENST00000553751 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.16■□□□□ 0.18
FOXA1-203ENST00000553751 ELF5Q9UKW6 265 aaPredicted RBP16.16■□□□□ 0.18
FOXA1-203ENST00000553751 FABP7O15540 132 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 HSPA12AO43301 675 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 CEACAM6P40199 344 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 SCAND1P57086 179 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 ARL6IP1Q15041 203 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 FAM71F2Q6NXP2 309 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 OR4A4PQ8NGN8 299 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 MAFIPQ8WZ33 124 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 NABP2Q9BQ15 211 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 ZNF251Q9BRH9 671 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 CABLES2Q9BTV7 478 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms