RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 HLA-DRB5Q30154 266 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR8B3Q8NGG8 313 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR8B2Q96RD0 313 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 NPTNQ9Y639 398 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 HS3ST3B1Q9Y662 390 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 HELTA6NFD8 242 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 SRSF10O75494 262 aaKnown RBP13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 GOSR1O95249 250 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 HOXA6P31267 233 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 SRD5A3Q9H8P0 318 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 TRAV34A0A0B4J273 112 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 SHISA3A0PJX4 238 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 IGKV3-11P04433 115 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 UCP2P55851 309 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 SNAI3Q3KNW1 292 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 CYB561D1Q8N8Q1 229 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 HSF4Q9ULV5 492 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 SPAARA0A1B0GVQ0 90 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 HPRT1P00492 218 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 C10orf113Q5VZT2 155 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 C1orf174Q8IYL3 243 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR1L6Q8NGR2 347 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR1L8Q8NGR8 309 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR4X1Q8NH49 305 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 AQP10Q96PS8 301 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 NUDT16L1Q9BRJ7 211 aaKnown RBP13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A1W2PRD5 423 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A1W2PRF3 423 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A1W2PRM7 423 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 J3QR06 171 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 HKR1P10072 659 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 PUSL1Q8N0Z8 303 aaKnown RBP13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR10C1Q96KK4 312 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 MS4A5Q9H3V2 200 aa13.26□□□□□ -0.29
ARHGEF40-202ENST00000553709 DHRS7CA6NNS2 312 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 GTF2H5Q6ZYL4 71 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 GRAMD2BQ96HH9 432 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 CD74P04233 296 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 CD1BP29016 333 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 FAM214BQ7L5A3 538 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR4C5Q8NGB2 326 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 C5orf66Q9H5L9 145 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 PITPNC1Q9UKF7 332 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 M0R2Z0 102 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 GNG7O60262 68 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 LINC00271P0C7V0 271 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 ACP1P24666 158 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 UBE2V2Q15819 145 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 TPRX1Q8N7U7 411 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 SAP25Q8TEE9 199 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 FAM186AA6NE01 2351 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 CLDN14O95500 239 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR2H2O95918 312 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 P01737 135 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 HBZP02008 142 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 ZNF273Q14593 569 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 RIPPLY2Q5TAB7 128 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 LRP11Q86VZ4 500 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 ABHD14BQ96IU4 210 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 TUBD1Q9UJT1 453 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 INSIG2Q9Y5U4 225 aa13.25□□□□□ -0.29
ARHGEF40-202ENST00000553709 NPIPB13A6NJU9 1138 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 NPIPB4C9JG80 1138 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 C16orf97H3BN30 126 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 MGST3O14880 152 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 C1QL1O75973 258 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 PERPQ96FX8 193 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A087X0M5 115 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A1B0GX30 115 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 A0A1W2PPE3 182 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 TMEM229AB2RXF0 380 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 LTBRP36941 435 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 Q5BKY6 102 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 MRPL54Q6P161 138 aaKnown RBP13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 C19orf48Q6RUI8 117 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 STXBP6Q8NFX7 210 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 IGSF23A1L1A6 192 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 RAB29O14966 203 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 UCNP55089 124 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 RSG1Q9BU20 258 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR51B2Q9Y5P1 312 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 TMEM14DPA8MWL7 114 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 TCAPO15273 167 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 ELOBQ15370 118 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 Q96M66 194 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 MIOXQ9UGB7 285 aa13.24□□□□□ -0.29
ARHGEF40-202ENST00000553709 CXorf66Q5JRM2 361 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 DNASE2BQ8WZ79 361 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 AURKAIP1Q9NWT8 199 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 PLXNA3P51805 1871 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 ZNHIT1O43257 154 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 COL8A1P27658 744 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 ASCL3Q9NQ33 180 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 PIKFYVEQ9Y2I7 2098 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 OR2A4O95047 310 aa13.23□□□□□ -0.29
ARHGEF40-202ENST00000553709 SFTPCP11686 197 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms