RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 EFNB1P98172 346 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 ZNF45Q02386 682 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 PTGES3Q15185 160 aaKnown RBP10.31□□□□□ -0.76
PRPF39-204ENST00000553605 ATAD3CQ5T2N8 411 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 SYT6Q5T7P8 510 aaPredicted RBP10.31□□□□□ -0.76
PRPF39-204ENST00000553605 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 Q6ZWC4 215 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 STX19Q8N4C7 294 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 BVESQ8NE79 360 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 OR5D14Q8NGL3 314 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 SNAPC3Q92966 411 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 MRPS24Q96EL2 167 aaKnown RBP10.31□□□□□ -0.76
PRPF39-204ENST00000553605 WDR89Q96FK6 387 aaPredicted RBP10.31□□□□□ -0.76
PRPF39-204ENST00000553605 PRRG3Q9BZD7 231 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 OR2S2Q9NQN1 319 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 ZC4H2Q9NQZ6 224 aa10.31□□□□□ -0.76
PRPF39-204ENST00000553605 GABRPO00591 440 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 GEMIN2O14893 280 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 XRCC3O43542 346 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 FADS2O95864 444 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 GSTP1P09211 210 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 RAP2AP10114 183 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 KIR2DS2P43631 304 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 OR3A3P47888 321 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 MNAT1P51948 309 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 NANOS3P60323 173 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 ALKBH1Q13686 389 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 C6orf183Q5T699 404 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 LPCAT4Q643R3 524 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 FAM131AQ6UXB0 335 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 GID4Q8IVV7 300 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 SERPINA12Q8IW75 414 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 DEFB107AQ8IZN7 70 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 OR4K15Q8NH41 348 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 TMEM163Q8TC26 289 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 GPER1Q99527 375 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 ELAC2Q9BQ52 826 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 FAM192AQ9GZU8 254 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 PARP12Q9H0J9 701 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 RCC2Q9P258 522 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 METTL1Q9UBP6 276 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 WARS2Q9UGM6 360 aaKnown RBP10.3□□□□□ -0.76
PRPF39-204ENST00000553605 ING4Q9UNL4 249 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 DNAH11Q96DT5 4516 aa10.3□□□□□ -0.76
PRPF39-204ENST00000553605 A0A0B4J203 849 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 PRSS29PA6NIE9 313 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 RBM11P57052 281 aaKnown RBP10.29□□□□□ -0.76
PRPF39-204ENST00000553605 DEFA5Q01523 94 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 GNMTQ14749 295 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 FXYD3Q14802 87 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 DEFB135Q30KP9 77 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 NHLRC3Q5JS37 347 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 ASCL4Q6XD76 172 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 DHFR2Q86XF0 187 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 OR52L2PQ8NGH6 319 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 OR52N1Q8NH53 320 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 GRPEL2Q8TAA5 225 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 RNF183Q96D59 192 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 CPNE2Q96FN4 548 aaPredicted RBP10.29□□□□□ -0.76
PRPF39-204ENST00000553605 USMG5Q96IX5 58 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 IL4I1Q96RQ9 567 aa10.29□□□□□ -0.76
PRPF39-204ENST00000553605 SAA2-SAA4A0A096LPE2 208 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 SLC22A1O15245 554 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 IFNA4P05014 189 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
PRPF39-204ENST00000553605 ATP6V1E1P36543 226 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 TCTAP57738 103 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 ZNF85Q03923 595 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 TRIM25Q14258 630 aaKnown RBP10.28□□□□□ -0.76
PRPF39-204ENST00000553605 MPV17LQ2QL34 196 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 FDX2Q6P4F2 183 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 LINC00596Q86U02 117 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 OR52B4Q8NGK2 314 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 GHSRQ92847 366 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 TINAGL1Q9GZM7 467 aaPredicted RBP10.28□□□□□ -0.76
PRPF39-204ENST00000553605 TECRQ9NZ01 308 aaKnown RBP10.28□□□□□ -0.76
PRPF39-204ENST00000553605 DNAH17Q9UFH2 4485 aa10.28□□□□□ -0.76
PRPF39-204ENST00000553605 HERC1Q15751 4861 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 H7C2Y5 167 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 CDRT1O95170 752 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 FOLR2P14207 255 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 RCC1P18754 421 aaPredicted RBP10.27□□□□□ -0.77
PRPF39-204ENST00000553605 MC5RP33032 325 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 PPP1CCP36873 323 aaKnown RBP10.27□□□□□ -0.77
PRPF39-204ENST00000553605 CCR9P51686 369 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 APOC4P55056 127 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 PSG5Q15238 335 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 TRAT1Q6PIZ9 186 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 KCTD20Q7Z5Y7 419 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 PARP16Q8N5Y8 322 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 C2CD4CQ8TF44 421 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 RNF5Q99942 180 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 METTL9Q9H1A3 318 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 TAF9BQ9HBM6 251 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 PKD1P98161 4303 aa10.27□□□□□ -0.77
PRPF39-204ENST00000553605 OR5H14A6NHG9 310 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 MCRIP1C9JLW8 97 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 BMPR1BO00238 502 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 UBE2CO00762 179 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms