RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ARFRP1Q13795 201 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 CDNFQ49AH0 187 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 FOXB2Q5VYV0 432 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 TRAT1Q6PIZ9 186 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 Q6ZS46 218 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 SETD6Q8TBK2 473 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 CAPSLQ8WWF8 208 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 PRSS22Q9GZN4 317 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 SLIRPQ9GZT3 109 aaKnown RBP18.92■□□□□ 0.62
TDP1-205ENST00000553527 ZNF702PQ9H963 129 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.92■□□□□ 0.62
TDP1-205ENST00000553527 TRRAPQ9Y4A5 3859 aa18.92■□□□□ 0.62
TDP1-205ENST00000553527 TRAV18A0A075B6X5 111 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 C12orf77C9JDV5 145 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 TIMM23O14925 209 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 RGS5O15539 181 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 NAPSAO96009 420 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 RCC1P18754 421 aaPredicted RBP18.91■□□□□ 0.62
TDP1-205ENST00000553527 MADCAM1Q13477 382 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 DIAPH2-AS1Q14236 149 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 FBLN7Q53RD9 439 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 TMEM69Q5SWH9 247 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 CCDC144NLQ6NUI1 221 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 TREML4Q6UXN2 200 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 MOB1BQ7L9L4 216 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 KLHDC1Q8N7A1 406 aa18.91■□□□□ 0.62
TDP1-205ENST00000553527 C6orf62Q9GZU0 229 aaPredicted RBP18.91■□□□□ 0.62
TDP1-205ENST00000553527 TMEM235A6NFC5 223 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 FAM25AB3EWG3 89 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 FAM25CB3EWG5 89 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 FAM25GB3EWG6 89 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 XRCC3O43542 346 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 PEX14O75381 377 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 ELK1P19419 428 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 C5orf24Q7Z6I8 188 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 IZUMO1Q8IYV9 350 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 DTX3Q8N9I9 347 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 OR1L1Q8NH94 360 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 MCFD2Q8NI22 146 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 SLC25A33Q9BSK2 321 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 MBNL3Q9NUK0 354 aaKnown RBP18.9■□□□□ 0.62
TDP1-205ENST00000553527 KCNIP1Q9NZI2 227 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 ADAM30Q9UKF2 790 aa18.9■□□□□ 0.62
TDP1-205ENST00000553527 M0QZ24 198 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 SPINT2O43291 252 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 TALDO1P37837 337 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 GNG2P59768 71 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 ZNF260Q3ZCT1 412 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 HACD4Q5VWC8 232 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 OR10V1Q8NGI7 309 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 RAB9BQ9NP90 201 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 GFOD1Q9NXC2 390 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 GNG12Q9UBI6 72 aa18.89■□□□□ 0.61
TDP1-205ENST00000553527 TRBV6-6A0A0A6YYG2 114 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 OOSP1A8MZH6 123 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 HBZP02008 142 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 REG1BP48304 166 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 LOXL3P58215 753 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 TAS2R20P59543 309 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 PNLIPRP3Q17RR3 467 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 C11orf88Q6PI97 169 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 LAX1Q8IWV1 398 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 DRAM1Q8N682 238 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 OR52M1Q8NGK5 317 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 OR56B4Q8NH76 319 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 TAF9BQ9HBM6 251 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 SERTAD4Q9NUC0 356 aa18.88■□□□□ 0.61
TDP1-205ENST00000553527 ELF5Q9UKW6 265 aaPredicted RBP18.88■□□□□ 0.61
TDP1-205ENST00000553527 CTDSP2O14595 271 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 FAM106CPP0CH98 169 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 PITPNAQ00169 270 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 HES1Q14469 280 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 HERPUD1Q15011 391 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 TMEM95Q3KNT9 176 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 ZNF880Q6PDB4 577 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 Q6ZPA2 131 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 ZNF554Q86TJ5 538 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 NUDCD2Q8WVJ2 157 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 AKR1E2Q96JD6 320 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 NXF2Q9GZY0 626 aaKnown RBP18.87■□□□□ 0.61
TDP1-205ENST00000553527 MIXL1Q9H2W2 232 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 AUNIPQ9H7T9 357 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 BATF3Q9NR55 127 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 EXTL2Q9UBQ6 330 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 MGAT4AQ9UM21 535 aa18.87■□□□□ 0.61
TDP1-205ENST00000553527 WNK1Q9H4A3 2382 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 A6NHS1 94 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 SH2D7A6NKC9 451 aaPredicted RBP18.86■□□□□ 0.61
TDP1-205ENST00000553527 SNRNP70P08621 437 aaKnown RBP18.86■□□□□ 0.61
TDP1-205ENST00000553527 FCGR3AP08637 254 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 HNF4GQ14541 408 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 ABCA11PQ4W5N1 156 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 MOB3BQ86TA1 216 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 Q8N2B8 174 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 RBM14Q96PK6 669 aaKnown RBP18.86■□□□□ 0.61
TDP1-205ENST00000553527 Q9N2K0 584 aa18.86■□□□□ 0.61
TDP1-205ENST00000553527 A0A1W2PPI3 338 aa18.85■□□□□ 0.61
TDP1-205ENST00000553527 SLC31A2O15432 143 aa18.85■□□□□ 0.61
TDP1-205ENST00000553527 RAB7AP51149 207 aa18.85■□□□□ 0.61
TDP1-205ENST00000553527 HLA-DRB3P79483 266 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms