RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 PTNP21246 168 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 CXCR1P25024 350 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 CLDN8P56748 225 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 HBA1P69905 142 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 EMX2Q04743 252 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 IFFO1Q0D2I5 559 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 TOMM34Q15785 309 aaPredicted RBP3.27□□□□□ -1.89
PCNX1-205ENST00000553508 NDUFAF6Q330K2 333 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 ARHGAP11BQ3KRB8 267 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 XKR7Q5GH72 579 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 PRR9Q5T870 116 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 C12orf54Q6X4T0 127 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 AAED1Q7RTV5 226 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 C10orf107Q8IVU9 208 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 C4orf33Q8N1A6 199 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 OR5D16Q8NGK9 328 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 OR4A15Q8NGL6 344 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 OR10G4Q8NGN3 311 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 OR5AK3PQ8NH89 298 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 ROPN1LQ96C74 230 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 SLC38A2Q96QD8 506 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 C1QTNF6Q9BXI9 259 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 DPY30Q9C005 99 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 CALML5Q9NZT1 146 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 FBXL3Q9UKT7 428 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 RFNGQ9Y644 331 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 VPS13CQ709C8 3753 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 TMED7-TICAM2A0A0A6YYA0 188 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 A0A1B0GVI7 797 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 BTBD17A6NE02 478 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 ERICH4A6NGS2 130 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 B4DSR2 109 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 RPL36A-HNRNPH2H7BZ11 118 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 RNF13O43567 381 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 AHSA1O95433 338 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 KRT75O95678 551 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 DBIP07108 87 aaKnown RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 OR4A8P0C604 315 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 STAG3L3P0CL85 134 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 OR12D1P0DN82 309 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 TCN1P20061 433 aaPredicted RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 S100A3P33764 101 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 ARR3P36575 388 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 GPR6P46095 362 aaPredicted RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 IDH2P48735 452 aaKnown RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 IDH3GP51553 393 aaPredicted RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 SUB1P53999 127 aaKnown RBP eCLIP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 RPS23P62266 143 aaKnown RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 ACTG1P63261 375 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 SYCNQ0VAF6 134 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 SCRN3Q0VDG4 424 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 C1DQ13901 141 aaKnown RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 LIN52Q52LA3 116 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 HIKESHIQ53FT3 197 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 ZNF684Q5T5D7 378 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 C9orf135Q5VTT2 229 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 OR4F3Q6IEY1 312 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 TNFAIP8L2Q6P589 184 aaPredicted RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 C5orf46Q6UWT4 87 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 EGFL6Q8IUX8 553 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 NUDCD3Q8IVD9 361 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 LRRC34Q8IZ02 419 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 KRTCAP2Q8N6L1 136 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 OR8J2Q8NGG1 315 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 OR52E4Q8NGH9 312 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 ZNF418Q8TF45 676 aaPredicted RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 TESCQ96BS2 214 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 NEURL3Q96EH8 262 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 TRNT1Q96Q11 434 aaKnown RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 PANX1Q96RD7 426 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 RHOXF2Q9BQY4 288 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 CHAC1Q9BUX1 264 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 PARD6BQ9BYG5 372 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 OR51I1Q9H343 314 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 RPP21Q9H633 154 aaKnown RBP3.26□□□□□ -1.89
PCNX1-205ENST00000553508 ZNF442Q9H7R0 627 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 CA10Q9NS85 328 aa3.26□□□□□ -1.89
PCNX1-205ENST00000553508 MALRD1Q5VYJ5 2156 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 HEATR1Q9H583 2144 aaKnown RBP3.25□□□□□ -1.89
PCNX1-205ENST00000553508 TMEM72A0PK05 275 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 hCG_2039718K7EN88 272 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 M0R233 179 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 BIRC5O15392 142 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 RBFOX2O43251 390 aaKnown RBP eCLIP3.25□□□□□ -1.89
PCNX1-205ENST00000553508 OR2T1O43869 369 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 MPZL1O95297 269 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 CPSF4O95639 269 aaKnown RBP3.25□□□□□ -1.89
PCNX1-205ENST00000553508 SERPINE1P05121 402 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 IGKV4-1P06312 121 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 RNASE2P10153 161 aaKnown RBP3.25□□□□□ -1.89
PCNX1-205ENST00000553508 ALDH3A1P30838 453 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 NPBWR2P48146 333 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 H3F3AP84243 136 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 ERCC8Q13216 396 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 OR7A5Q15622 319 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 TRMT5Q32P41 509 aaKnown RBP3.25□□□□□ -1.89
PCNX1-205ENST00000553508 C6orf226Q5I0X4 101 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 MRPL2Q5T653 305 aaKnown RBP3.25□□□□□ -1.89
PCNX1-205ENST00000553508 C1orf140Q5VVS0 124 aa3.25□□□□□ -1.89
PCNX1-205ENST00000553508 AP1ARQ63HQ0 302 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms