RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 SPSB1Q96BD6 273 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 C12orf43Q96C57 262 aaKnown RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 SMIM19Q96E16 107 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 CPNE2Q96FN4 548 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF184Q99676 751 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 NRIP2Q9BQI9 281 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 NEURL2Q9BR09 285 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 DCTN5Q9BTE1 182 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 SUCNR1Q9BXA5 334 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 ANKRD60Q9BZ19 345 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 DNTTIP1Q9H147 329 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 PPA2Q9H2U2 334 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 BANF2Q9H503 90 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 TMEM138Q9NPI0 162 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 PAK1IP1Q9NWT1 392 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 KAAG1Q9UBP8 84 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 OPN4Q9UHM6 478 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 MRPS28Q9Y2Q9 187 aaKnown RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 MAB21L2Q9Y586 359 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 TRAV8-7A0A075B6U6 113 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 IGHV4OR15-8A0A075B7B6 117 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SAA2-SAA4A0A096LPE2 208 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 TRAV39A0A0B4J263 110 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 IGKV1-12A0A0C4DH73 117 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 TEX13DA0A0J9YY54 714 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 MDFIC2A0A1B0GVS7 189 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SMIM31A0A1B0GVY4 71 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 MEIOCA2RUB1 952 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 FUOMA2VDF0 154 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 C15orf62A8K5M9 175 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 A8MXK9 166 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 K7N7A8 449 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 GABRPO00591 440 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 DENRO43583 198 aaKnown RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 GPR137BO60478 399 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 NOS1APO75052 506 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 FCN3O75636 299 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 VENTXO95231 258 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 FSTL3O95633 263 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 OR2H2O95918 312 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 IGKV1D-12P01611 117 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 IGHV1-69P01742 117 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 ALDOBP05062 364 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 CCL3L1P16619 93 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SRMP19623 302 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 NFYBP25208 207 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 MAPK3P27361 379 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 PSMB9P28065 219 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 CAV3P56539 151 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 RPS25P62851 125 aaKnown RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 ACTG1P63261 375 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SLC35A2P78381 396 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 ATXN7L3Q14CW9 347 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 VWC2Q2TAL6 325 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 DEFB112Q30KQ8 113 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 PIGYQ3MUY2 71 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 HSD17B12Q53GQ0 312 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 PAN3Q58A45 887 aaKnown RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 KLF17Q5JT82 389 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 FAM27D1Q5T7N8 215 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 GLT8D1Q68CQ7 371 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 GLIPR1L1Q6UWM5 242 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 Q6ZSR3 168 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 PRSS48Q7RTY5 328 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SAXO1Q8IYX7 474 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 OSR2Q8N2R0 312 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 MS4A15Q8N5U1 240 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 OR51T1Q8NGJ9 327 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SETD6Q8TBK2 473 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 FAM46BQ96A09 425 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SDSLQ96GA7 329 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 TBX15Q96SF7 602 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 TSC22D3Q99576 134 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 MGLLQ99685 303 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 CDCA4Q9BXL8 241 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 BARHL1Q9BZE3 327 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 SELENOIQ9C0D9 397 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 DUSP21Q9H596 190 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 HEXA-AS1Q9H8Q6 139 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 PLGRKTQ9HBL7 147 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 HMG20AQ9NP66 347 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 C19orf12Q9NSK7 152 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 FKBP14Q9NWM8 211 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 ST3GAL6Q9Y274 331 aa3.8□□□□□ -1.8
ATXN3-220ENST00000553491 AK6Q9Y3D8 172 aaKnown RBP3.8□□□□□ -1.8
ATXN3-220ENST00000553491 MXRA5Q9NR99 2828 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 MEIKINA0A087WXM9 373 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 TRGV10A0A0A0MS01 117 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 TRBV5-5A0A0J9YX44 114 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 LOC100506127A0A0U1RQW1 187 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 hADV38S2A0JD32 116 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 SMIM30A4D0T7 59 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 FAM172BPA6NC97 362 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 BTBD17A6NE02 478 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 MCRIP1C9JLW8 97 aa3.79□□□□□ -1.8
ATXN3-220ENST00000553491 TOR1AO14656 332 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms