RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 IGLV2-14P01704 120 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 MT-ND4LP03901 98 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 HOXA1P49639 335 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-205ENST00000553474 HBG1P69891 147 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 HBG2P69892 147 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 PAX5Q02548 391 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 SP5Q6BEB4 398 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-205ENST00000553474 ALKBH2Q6NS38 261 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 ODF3L1Q8IXM7 274 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-205ENST00000553474 OR1A1Q9P1Q5 309 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 RBM7Q9Y580 266 aaKnown RBP10.9□□□□□ -0.66
SHMT2-205ENST00000553474 MMP24Q9Y5R2 645 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 LAMA5O15230 3695 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 MEX3AA1L020 520 aaKnown RBP10.9□□□□□ -0.67
SHMT2-205ENST00000553474 OOEPA6NGQ2 149 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 ZNHIT1O43257 154 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 LYZL6O75951 148 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 C1QL1O75973 258 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 CST7O76096 145 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 CELA3BP08861 270 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 KITLGP21583 273 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 OMGP23515 440 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 NFYBP25208 207 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 CCL11P51671 97 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 UCNP55089 124 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 RAB5BP61020 215 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 AWAT1Q58HT5 328 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 MYPOPQ86VE0 399 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-205ENST00000553474 ZNF645Q8N7E2 425 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 RXFP4Q8TDU9 374 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 GALMQ96C23 342 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 TRIB1Q96RU8 372 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 PSMG3Q9BT73 122 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-205ENST00000553474 CXXC4Q9H2H0 198 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 CFAP47Q6ZTR5 3102 aa10.9□□□□□ -0.67
SHMT2-205ENST00000553474 C7orf77A4D0Y5 90 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 RBFOX3A6NFN3 312 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 AHRRA9YTQ3 701 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 HSPB1P04792 205 aaKnown RBP10.89□□□□□ -0.67
SHMT2-205ENST00000553474 CRYBA1P05813 215 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 CEACAM6P40199 344 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 SERF2P84101 59 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 SOHLH1Q5JUK2 328 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 TRAT1Q6PIZ9 186 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 C5orf24Q7Z6I8 188 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 PLSCR4Q9NRQ2 329 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
SHMT2-205ENST00000553474 A0A0G2JRQ6 117 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 A0A1B0GWJ7 208 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 K7ENP7 123 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 IFNA4P05014 189 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 PPP1CCP36873 323 aaKnown RBP10.88□□□□□ -0.67
SHMT2-205ENST00000553474 KIR2DL2P43627 348 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-205ENST00000553474 CATR1Q13166 79 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 P2RY6Q15077 328 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 SPSB3Q6PJ21 355 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 DRAM1Q8N682 238 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 TMEM217Q8N7C4 229 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 FDCSPQ8NFU4 85 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 OR10G4Q8NGN3 311 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 SEBOXQ9HB31 216 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-205ENST00000553474 CACNG5Q9UF02 275 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 LOC400499M0QZD8 3231 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 SCAF4O95104 1147 aaKnown RBP10.88□□□□□ -0.67
SHMT2-205ENST00000553474 IGKV1-39P01597 117 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 IGKV1D-39P04432 117 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 PMP22Q01453 160 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 IGFBP7Q16270 282 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 ZNF585BQ52M93 769 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 KHDC3LQ587J8 217 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 ZNF506Q5JVG8 444 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 MBNL2Q5VZF2 373 aaKnown RBP10.88□□□□□ -0.67
SHMT2-205ENST00000553474 LINC00518Q8N0U6 118 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 GCNT2Q8N0V5 402 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 SCGB1C1Q8TD33 95 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 GPHA2Q96T91 129 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 KCNS2Q9ULS6 477 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 FBXO7Q9Y3I1 522 aa10.88□□□□□ -0.67
SHMT2-205ENST00000553474 PKD1L2Q7Z442 2459 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 MGAQ8IWI9 3026 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 M0R036 132 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 WDR1O75083 606 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 IGKV1-5P01602 117 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 EPHA1P21709 976 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 MAS1LP35410 378 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 ASCL1P50553 236 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 EIF2S3LQ2VIR3 472 aaKnown RBP10.87□□□□□ -0.67
SHMT2-205ENST00000553474 SMIM21Q3B7S5 101 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 ZNF718Q3SXZ3 478 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 SLC25A24Q6NUK1 477 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 WDR31Q8NA23 367 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 NINJ1Q92982 152 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 PINX1Q96BK5 328 aaKnown RBP10.87□□□□□ -0.67
SHMT2-205ENST00000553474 C14orf79Q96F83 325 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 LURAP1Q96LR2 239 aa10.87□□□□□ -0.67
SHMT2-205ENST00000553474 PPP1R3CQ9UQK1 317 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms