RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 KCTD7Q96MP8 289 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 HSPB9Q9BQS6 159 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 TMED9Q9BVK6 235 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 TMEM59Q9BXS4 323 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 CHMP1AQ9HD42 196 aaPredicted RBP10□□□□□ -0.81
LINC00643-202ENST00000553426 SCN3BQ9NY72 215 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 KIAA1456Q9P272 454 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 EPPK1P58107 5090 aaKnown RBP10□□□□□ -0.81
LINC00643-202ENST00000553426 PTGES3LE9PB15 166 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 NBR2O15453 112 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 CDK1P06493 297 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 SRMP19623 302 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 HTR2CP28335 458 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 RPS27AP62979 156 aaKnown RBP9.99□□□□□ -0.81
LINC00643-202ENST00000553426 CFHR3Q02985 330 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 GNMTQ14749 295 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 HSD17B12Q53GQ0 312 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 LY6G6FQ5SQ64 297 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 RNLSQ5VYX0 342 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 FBLIM1Q8WUP2 373 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 IL1F10Q8WWZ1 152 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 B9D2Q9BPU9 175 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 PLEKHJ1Q9NW61 149 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 FKBP14Q9NWM8 211 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 PIPOXQ9P0Z9 390 aa9.99□□□□□ -0.81
LINC00643-202ENST00000553426 SEC14L6B5MCN3 397 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 CASQ2O14958 399 aaPredicted RBP9.98□□□□□ -0.81
LINC00643-202ENST00000553426 BPNT1O95861 308 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 HLA-DRB1P01911 266 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 VSIG8P0DPA2 414 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 PSMB8P28062 276 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 CHATP28329 748 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 RANBP1P43487 201 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 SPHARQ15513 63 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 MED22Q15528 200 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 C1orf100Q5SVJ3 147 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 OR10K2Q6IF99 312 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 LAIR2Q6ISS4 152 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 LIN54Q6MZP7 749 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 FAM71F2Q6NXP2 309 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 ZNF833PQ6ZTB9 187 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 CEACAM19Q7Z692 300 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 OR11H1Q8NG94 326 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 SETD6Q8TBK2 473 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 NABP2Q9BQ15 211 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 SULT4A1Q9BR01 284 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 URM1Q9BTM9 101 aaKnown RBP9.98□□□□□ -0.81
LINC00643-202ENST00000553426 FAAP24Q9BTP7 215 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 MRPL20Q9BYC9 149 aaKnown RBP9.98□□□□□ -0.81
LINC00643-202ENST00000553426 OR51J1Q9H342 316 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 GHITMQ9H3K2 345 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 RIMS4Q9H426 269 aaPredicted RBP9.98□□□□□ -0.81
LINC00643-202ENST00000553426 PARP11Q9NR21 331 aa9.98□□□□□ -0.81
LINC00643-202ENST00000553426 SAA2-SAA4A0A096LPE2 208 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 SAA2P0DJI9 122 aaPredicted RBP9.97□□□□□ -0.81
LINC00643-202ENST00000553426 BLVRBP30043 206 aaPredicted RBP9.97□□□□□ -0.81
LINC00643-202ENST00000553426 OR3A3P47888 321 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 INSL4Q14641 139 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 PLGLAQ15195 96 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 HMGN3Q15651 99 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 C5orf64Q2M2E5 130 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 C6orf141Q5SZD1 244 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 C6orf201Q7Z4U5 140 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 ODF3L1Q8IXM7 274 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 OR6M1Q8NGM8 313 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 UFD1Q92890 307 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 UBE2E2Q96LR5 201 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 ANKRD60Q9BZ19 345 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 PLGRKTQ9HBL7 147 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 MGAT4AQ9UM21 535 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 VSIG4Q9Y279 399 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 COL7A1Q02388 2944 aa9.97□□□□□ -0.81
LINC00643-202ENST00000553426 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 OR5H14A6NHG9 310 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 RAB29O14966 203 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 SLC22A1O15245 554 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 ATP6V0E1O15342 81 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 HSPA12AO43301 675 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 GSTP1P09211 210 aaKnown RBP9.96□□□□□ -0.82
LINC00643-202ENST00000553426 OR8U8P0C7N1 319 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 ARSBP15848 533 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 LUMP51884 338 aaPredicted RBP9.96□□□□□ -0.82
LINC00643-202ENST00000553426 FAM27D1Q5T7N8 215 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 C11orf87Q6NUJ2 197 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 LRRTM1Q86UE6 522 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 SVOPQ8N4V2 548 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 NPBQ8NG41 125 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 OR1N2Q8NGR9 330 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 EDARADDQ8WWZ3 215 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 TM2D1Q9BX74 207 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 SLC23A1Q9UHI7 598 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 TPRKBQ9Y3C4 175 aa9.96□□□□□ -0.82
LINC00643-202ENST00000553426 RYR2Q92736 4967 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 TMEM14DPA8MWL7 114 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 H7C2Y5 167 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms