RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 C8orf31Q8N9H6 132 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 ZNF596Q8TC21 504 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 OR10C1Q96KK4 312 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 C11orf1Q9H5F2 150 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 CCL28Q9NRJ3 127 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 TMEM106BQ9NUM4 274 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 COMMD9Q9P000 198 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 LPAR3Q9UBY5 353 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 OR14J1Q9UGF5 321 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 U3KQ87 197 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 ROS1P08922 2347 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 RAI1Q7Z5J4 1906 aaPredicted RBP8.14□□□□□ -1.11
TMEM116-216ENST00000552800 PPIAL4EA0A075B759 164 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 KBTBD11-OT1A0A1B0GTJ5 212 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF729A6NN14 1252 aaPredicted RBP8.14□□□□□ -1.11
TMEM116-216ENST00000552800 PPIAL4DF5H284 164 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
TMEM116-216ENST00000552800 H0YIZ8 118 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 HSPB6O14558 160 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 BET1O15155 118 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 SPINT2O43291 252 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 PPIAL4FP0DN26 164 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 MMP9P14780 707 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 CEACAM6P40199 344 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 CEBPDP49716 269 aaPredicted RBP8.14□□□□□ -1.11
TMEM116-216ENST00000552800 ID3Q02535 119 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 SLC9A3R2Q15599 337 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 NMSQ5H8A3 153 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 GGNBP1Q5YKI7 109 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF66Q6ZN08 573 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 C5orf24Q7Z6I8 188 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 SELENOHQ8IZQ5 122 aaKnown RBP8.14□□□□□ -1.11
TMEM116-216ENST00000552800 MUC15Q8N387 334 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 OR13A1Q8NGR1 328 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 LHFPL5Q8TAF8 219 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 CASTOR1Q8WTX7 329 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 AQP10Q96PS8 301 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 TP53RKQ96S44 253 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 CHIAQ9BZP6 476 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 SAP30LQ9HAJ7 183 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 CBLN4Q9NTU7 201 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 COA4Q9NYJ1 87 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 OR1A1Q9P1Q5 309 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 CLN8Q9UBY8 286 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 PPIAL4AQ9Y536 164 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 NBASA2RRP1 2371 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 USF3Q68DE3 2245 aa8.14□□□□□ -1.11
TMEM116-216ENST00000552800 ACACBO00763 2458 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ABCA4P78363 2273 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 A0A087X0M5 115 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 A0A1B0GX30 115 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 FAM90A27PA6NNH2 459 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 RNF212BA8MTL3 300 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 MPTX1A8MV57 137 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ADAP1O75689 374 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 PLAUP00749 431 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 PET100P0DJ07 73 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF16P17020 682 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-216ENST00000552800 IL2RGP31785 369 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 GABRA2P47869 451 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 FXYD4P59646 89 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 CCL8P80075 99 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 OPCMLQ14982 345 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 AARDQ4LEZ3 155 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF585BQ52M93 769 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 SLC51BQ86UW2 128 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ZNRF1Q8ND25 227 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF680Q8NEM1 530 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 OR5T2Q8NGG2 359 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 OR4D5Q8NGN0 318 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 OR1L1Q8NH94 360 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 THAP6Q8TBB0 222 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 SECTM1Q8WVN6 248 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 NEU4Q8WWR8 484 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-216ENST00000552800 WFDC12Q8WWY7 111 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 IGFBPL1Q8WX77 278 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 RBPMSQ93062 196 aaKnown RBP8.13□□□□□ -1.11
TMEM116-216ENST00000552800 TOMM40LQ969M1 308 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 ARL11Q969Q4 196 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 SEC22AQ96IW7 307 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 MFFQ9GZY8 342 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 METTL8Q9H825 291 aaKnown RBP8.13□□□□□ -1.11
TMEM116-216ENST00000552800 LINC00312Q9Y6C7 94 aa8.13□□□□□ -1.11
TMEM116-216ENST00000552800 A0A1B0GU03 582 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 C5orf51A6NDU8 294 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 KIAA1324LA8MWY0 1029 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-216ENST00000552800 L7N2F9 121 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 RBFOX2O43251 390 aaKnown RBP eCLIP8.12□□□□□ -1.11
TMEM116-216ENST00000552800 ZG16O60844 167 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 PROP1O75360 226 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 DEDDO75618 318 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 RP2O75695 350 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF205O95201 554 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 P0C879 139 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 PHLDA2Q53GA4 152 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 TMUB2Q71RG4 321 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 TCF23Q7RTU1 214 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 LYZL2Q7Z4W2 148 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 FAM219AQ8IW50 185 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms