RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 HES1Q14469 280 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 NSUN5P1Q3KNT7 163 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 IDNKQ5T6J7 187 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 MOB3BQ86TA1 216 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 TPRA1Q86W33 373 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 LYG1Q8N1E2 194 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 ZNF439Q8NDP4 499 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 OR10R2Q8NGX6 335 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 RAB3CQ96E17 227 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 RBM14Q96PK6 669 aaKnown RBP11.17□□□□□ -0.62
DDX54-210ENST00000552375 CITED2Q99967 270 aaPredicted RBP11.17□□□□□ -0.62
DDX54-210ENST00000552375 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 ABRACLQ9P1F3 81 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 M0QZK8 103 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 CD3GP09693 182 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 RAB6AP20340 208 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 IL3RAP26951 378 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 ZNF134P52741 427 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 MRPS15P82914 257 aaKnown RBP11.16□□□□□ -0.62
DDX54-210ENST00000552375 HNF4GQ14541 408 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 CT45A1Q5HYN5 189 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 ZNF880Q6PDB4 577 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 SLC16A12Q6ZSM3 486 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 MOB1BQ7L9L4 216 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 IZUMO1Q8IYV9 350 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 OR5H6Q8NGV6 325 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 CT45A3Q8NHU0 189 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 PARP12Q9H0J9 701 aaKnown RBP11.16□□□□□ -0.62
DDX54-210ENST00000552375 OR1A1Q9P1Q5 309 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 JPT1Q9UK76 154 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 ELF5Q9UKW6 265 aaPredicted RBP11.16□□□□□ -0.62
DDX54-210ENST00000552375 HSF4Q9ULV5 492 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 KCNK7Q9Y2U2 307 aa11.16□□□□□ -0.62
DDX54-210ENST00000552375 IGHV1-3A0A0C4DH29 117 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 TRIM64CA6NLI5 447 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 MFNGO00587 321 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 IGKV1D-33P01593 117 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 IGKV1-33P01594 117 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 HIST1H1DP16402 221 aaKnown RBP11.15□□□□□ -0.62
DDX54-210ENST00000552375 TMEM11P17152 192 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 RANBP1P43487 201 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 TIMM50Q3ZCQ8 353 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 ABCA11PQ4W5N1 156 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 MORN2Q502X0 79 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 C9orf152Q5JTZ5 239 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 SLC25A48Q6ZT89 311 aaKnown RBP11.15□□□□□ -0.62
DDX54-210ENST00000552375 LINC00311Q8N616 119 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 GALMQ96C23 342 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 SLC23A1Q9UHI7 598 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 ZNF230Q9UIE0 474 aaPredicted RBP11.15□□□□□ -0.62
DDX54-210ENST00000552375 MOB4Q9Y3A3 225 aa11.15□□□□□ -0.62
DDX54-210ENST00000552375 METTL21EPA6NDL7 271 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 G3V4G9 280 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 RAB27BO00194 218 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 AMY1AP04745 511 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 AMY2AP04746 511 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 LPLP06858 475 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 FCGR3AP08637 254 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 SCTP09683 121 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 FAM106CPP0CH98 169 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 OR3A3P47888 321 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 SERPINB10P48595 397 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 RAB7AP51149 207 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 NCS1P62166 190 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 ZNF816Q0VGE8 651 aaPredicted RBP11.14□□□□□ -0.63
DDX54-210ENST00000552375 ARFRP1Q13795 201 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 BEAN1Q3B7T3 259 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 TMEM30BQ3MIR4 351 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 KPRPQ5T749 579 aaPredicted RBP11.14□□□□□ -0.63
DDX54-210ENST00000552375 THNSL2Q86YJ6 484 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 OR8H3Q8N146 312 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 RTN4IP1Q8WWV3 396 aaPredicted RBP11.14□□□□□ -0.63
DDX54-210ENST00000552375 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 FUNDC2Q9BWH2 189 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 NAA50Q9GZZ1 169 aaKnown RBP11.14□□□□□ -0.63
DDX54-210ENST00000552375 Q9N2K0 584 aa11.14□□□□□ -0.63
DDX54-210ENST00000552375 TMEM235A6NFC5 223 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 ZNF736B4DX44 427 aaPredicted RBP11.13□□□□□ -0.63
DDX54-210ENST00000552375 HSPA12AO43301 675 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 GAPDHP04406 335 aaKnown RBP11.13□□□□□ -0.63
DDX54-210ENST00000552375 VBP1P61758 197 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 HTD2P86397 168 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 CD83Q01151 205 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 ZNF554Q86TJ5 538 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 TGIF2LXQ8IUE1 241 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 C8orf31Q8N9H6 132 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 OR2AK2Q8NG84 335 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 OR5AU1Q8NGC0 362 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 NUDCD2Q8WVJ2 157 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 SLC25A38Q96DW6 304 aa11.13□□□□□ -0.63
DDX54-210ENST00000552375 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
DDX54-210ENST00000552375 RHBDL2Q9NX52 303 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms