RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 FOXA2Q9Y261 457 aaPredicted RBP16.6■□□□□ 0.25
SMARCD1-212ENST00000551966 HSPA12AO43301 675 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 LIMS3P0CW19 117 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 LIMS4P0CW20 117 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 IGFBP3P17936 291 aaPredicted RBP16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 PPP1CCP36873 323 aaKnown RBP16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 HAGHQ16775 308 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 ZNF833PQ6ZTB9 187 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 RHOXF1Q8NHV9 184 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 RHOVQ96L33 236 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 KRTAP17-1Q9BYP8 105 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 CST11Q9H112 138 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 FBXL15Q9H469 300 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 SPACA1Q9HBV2 294 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 MBNL3Q9NUK0 354 aaKnown RBP16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 ERGIC3Q9Y282 383 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 GMPPBQ9Y5P6 360 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 PEX16Q9Y5Y5 336 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 A3GALT2U3KPV4 340 aa16.59■□□□□ 0.25
SMARCD1-212ENST00000551966 EI24O14681 340 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 SC5DO75845 299 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 SNRPBP14678 240 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 PPP3R1P63098 170 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 RAB40BQ12829 278 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 C1orf146Q5VVC0 180 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 RPL22L1Q6P5R6 122 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 TRAT1Q6PIZ9 186 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 OR13C5Q8NGS8 318 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 FLYWCH2Q96CP2 140 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 MS4A10Q96PG2 267 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 MRPS18AQ9NVS2 196 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 KIAA1456Q9P272 454 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 GAB2Q9UQC2 676 aa16.58■□□□□ 0.24
SMARCD1-212ENST00000551966 UBE2QL1A1L167 161 aa16.57■□□□□ 0.24
SMARCD1-212ENST00000551966 GPR176Q14439 515 aa16.57■□□□□ 0.24
SMARCD1-212ENST00000551966 SIGIRRQ6IA17 410 aa16.57■□□□□ 0.24
SMARCD1-212ENST00000551966 CD200R1LQ6Q8B3 271 aa16.57■□□□□ 0.24
SMARCD1-212ENST00000551966 SGPP2Q8IWX5 399 aa16.57■□□□□ 0.24
SMARCD1-212ENST00000551966 SPATA25Q9BR10 227 aa16.57■□□□□ 0.24
SMARCD1-212ENST00000551966 STUB1Q9UNE7 303 aa16.57■□□□□ 0.24
SMARCD1-212ENST00000551966 SAA2-SAA4A0A096LPE2 208 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 RRHO14718 337 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 YPEL1O60688 119 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 GPX5O75715 221 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 SAA2P0DJI9 122 aaPredicted RBP16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 RIPK1Q13546 671 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 CCDC58Q4VC31 144 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 GLIPR1L1Q6UWM5 242 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 TCTEX1D1Q8N7M0 179 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 MRPS24Q96EL2 167 aaKnown RBP16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 YPEL2Q96QA6 119 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 FAM103A1Q9BTL3 118 aaKnown RBP16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 ELOVL1Q9BW60 279 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 BANF2Q9H503 90 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 JPT1Q9UK76 154 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 ORC6Q9Y5N6 252 aa16.56■□□□□ 0.24
SMARCD1-212ENST00000551966 TRAV8-7A0A075B6U6 113 aa16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 CA11O75493 328 aa16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 HTD2P86397 168 aa16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 LY6G6FQ5SQ64 297 aa16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 PPP1R27Q86WC6 154 aa16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 MRPL30Q8TCC3 161 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 MUL1Q969V5 352 aa16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 RSRP1Q9BUV0 290 aa16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 CNOT2Q9NZN8 540 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-212ENST00000551966 OGG1O15527 345 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 CT45A6P0DMU7 189 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 CT45A5P0DMU8 189 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 CT45A7P0DMV0 189 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 ARSBP15848 533 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 FUT3P21217 361 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 ETV1P50549 477 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 ALDH3A2P51648 485 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 TMEM267Q0VDI3 215 aaPredicted RBP16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 AKIRIN2Q53H80 203 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 ACTBL2Q562R1 376 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 OR2G6Q5TZ20 316 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 UNQ5815/PRO19632Q6UWF5 114 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 FAM131AQ6UXB0 335 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 IL34Q6ZMJ4 242 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 ANKRD13BQ86YJ7 626 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 Q96MT0 163 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 IFI27L2Q9H2X8 130 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 KCNIP1Q9NZI2 227 aa16.54■□□□□ 0.24
SMARCD1-212ENST00000551966 TRBV5-5A0A0J9YX44 114 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 MAS1P04201 325 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 GLAP06280 429 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 TPPP2P59282 170 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 PYHIN1Q6K0P9 492 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 ZNF554Q86TJ5 538 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 LFNGQ8NES3 379 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 APH1BQ8WW43 257 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 PYDC1Q8WXC3 89 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 SELENOIQ9C0D9 397 aa16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 FGF20Q9NP95 211 aaPredicted RBP16.53■□□□□ 0.24
SMARCD1-212ENST00000551966 PLECQ15149 4684 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-212ENST00000551966 FAM90A7PA6NKC0 464 aa16.52■□□□□ 0.24
SMARCD1-212ENST00000551966 FAM90A23PA8MXZ1 464 aa16.52■□□□□ 0.24
SMARCD1-212ENST00000551966 ARPC1BO15143 372 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-212ENST00000551966 LALBAP00709 142 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms