RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 TMEM5Q9Y2B1 443 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 A3GALT2U3KPV4 340 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 U3KQV3 271 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 AGRNO00468 2067 aa1.6□□□□□ -2.15
PTCH1-223ENST00000551623 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 A0A087X002 238 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 NBDYA0A0U1RRE5 68 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 A0A1W2PN81 502 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 A0A1W2PRQ8 180 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 MEX3AA1L020 520 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 HMX3A6NHT5 357 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 C2orf70A6NJV1 201 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF705EA8MWA4 302 aaPredicted RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF736B4DX44 427 aaPredicted RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 BIRC5O15392 142 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 NBR2O15453 112 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RIPK2O43353 540 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 LANCL1O43813 399 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ENTPD6O75354 484 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 HAND1O96004 215 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RENP00797 406 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 NRASP01111 189 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 IGHV3-11P01762 117 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 BPGMP07738 259 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 C8orf88P0DMB2 117 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 FOLR2P14207 255 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 HIST1H1CP16403 213 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 PTMSP20962 102 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 HTR1FP30939 366 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 FCGR2BP31994 310 aaPredicted RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 CHRNA7P36544 502 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 MAP2K4P45985 399 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RPL14P50914 215 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 GZMMP51124 257 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 PRKXP51817 358 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 POLR2JP52435 117 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 BLVRAP53004 296 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 TPPP2P59282 170 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 TAS2R41P59536 307 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ACTBP60709 375 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 CX3CL1P78423 397 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 MRPS25P82663 173 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM267Q0VDI3 215 aaPredicted RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 DGCR6Q14129 220 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 EDDM3AQ14507 147 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 MMDQ15546 238 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 LRRC36Q1X8D7 754 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ACTBL2Q562R1 376 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ZC2HC1BQ5TFG8 222 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 FAM131AQ6UXB0 335 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 DLEU7Q6UYE1 221 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF562Q6V9R5 426 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 SLC25A48Q6ZT89 311 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 TRAPPC6BQ86SZ2 158 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF565Q8N9K5 539 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 POC5Q8NA72 575 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 CHST4Q8NCG5 386 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF439Q8NDP4 499 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 OR51T1Q8NGJ9 327 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 OR2T4Q8NH00 348 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ZNRF2Q8NHG8 242 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 PIGCQ92535 297 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ASB9Q96DX5 294 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 GALNT14Q96FL9 552 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 USMG5Q96IX5 58 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM68Q96MH6 324 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 NMNAT3Q96T66 252 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 SPAG8Q99932 426 aaPredicted RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RARRES2Q99969 163 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 SULT4A1Q9BR01 284 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 FUZQ9BT04 418 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM70Q9BUB7 260 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ABHD6Q9BV23 337 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ANKRD60Q9BZ19 345 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 C20orf27Q9GZN8 174 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RERGLQ9H628 205 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RPRD1BQ9NQG5 326 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 PARP11Q9NR21 331 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 CALYQ9NYX4 217 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 PEF1Q9UBV8 284 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 ERGIC3Q9Y282 383 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 PAM16Q9Y3D7 125 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RPL36Q9Y3U8 105 aaKnown RBP1.59□□□□□ -2.15
PTCH1-223ENST00000551623 IER3IP1Q9Y5U9 82 aa1.59□□□□□ -2.15
PTCH1-223ENST00000551623 RNF213Q63HN8 5207 aa1.59□□□□□ -2.16
PTCH1-223ENST00000551623 DNAH6Q9C0G6 4158 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 LRP1BQ9NZR2 4599 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IGLV2-18A0A075B6J9 118 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IGKV1-27A0A075B6S5 117 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 DEFB131BA0A096LNP1 70 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 TRBV9A0A0B4J1U6 114 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IGHV3-72A0A0B4J1Y9 119 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 A0A1W2PPQ1 181 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM213A2RRL7 107 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 PMS2P5A8MQ11 134 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MPTX1A8MV57 137 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 EVPLLA8MZ36 301 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 C15orf65H3BRN8 121 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CXCR6O00574 342 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms