RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 FAM107BQ9H098 131 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DHX35Q9H5Z1 703 aaKnown RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ARMC7Q9H6L4 198 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 SLC2A9Q9NRM0 540 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 SPANXB1Q9NS25 103 aaPredicted RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 CISHQ9NSE2 258 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DMAC2Q9NW81 257 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 CMTM6Q9NX76 183 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 MAT2BQ9NZL9 334 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 VAPAQ9P0L0 249 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 OPN4Q9UHM6 478 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 CYB5R1Q9UHQ9 305 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 MMACHCQ9Y4U1 282 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 ARL5AQ9Y689 179 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DNAH3Q8TD57 4116 aa3.63□□□□□ -1.83
CPSF6-206ENST00000550987 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
CPSF6-206ENST00000550987 IGLV11-55A0A075B6I3 123 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 IGLV1-36A0A0B4J1U3 117 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 A6NDN8 102 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 SLC22A20A6NK97 555 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 OR2AT4A6NND4 320 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 NCBP2LA6PVI3 153 aaKnown RBP3.62□□□□□ -1.83
CPSF6-206ENST00000550987 F5H5T6 163 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 K7EMT4 169 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 GABRPO00591 440 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 PLPP3O14495 311 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 SGCEO43556 437 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 FADS1O60427 444 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 TNFP01375 233 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 HLA-DPB1P04440 258 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 KLK1P06870 262 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 RAB3AP20336 220 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 USF1P22415 310 aaPredicted RBP3.62□□□□□ -1.83
CPSF6-206ENST00000550987 ME2P23368 584 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 RBM34P42696 430 aaKnown RBP3.62□□□□□ -1.83
CPSF6-206ENST00000550987 OMPP47874 163 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 GCLMP48507 274 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 HCAR3P49019 387 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 AP2S1P53680 142 aaPredicted RBP3.62□□□□□ -1.83
CPSF6-206ENST00000550987 PPP1CBP62140 327 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 SPIN3Q5JUX0 258 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 BRMS1LQ5PSV4 323 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 SYPL2Q5VXT5 272 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 RESP18Q5W5W9 173 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 PLET1Q6UQ28 207 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 WDR82Q6UXN9 313 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 AHSA2Q719I0 299 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 TMED4Q7Z7H5 227 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 C11orf53Q8IXP5 236 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 LINC01555Q8NAE3 123 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 NOXO1Q8NFA2 376 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 OR6K6Q8NGW6 343 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 CCL4L1Q8NHW4 92 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 BLOC1S5Q8TDH9 187 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 NEK7Q8TDX7 302 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 SGTBQ96EQ0 304 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 BTN2A3PQ96KV6 586 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 Q96MT0 163 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 RILPQ96NA2 401 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 SCGB3A2Q96PL1 93 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 RBBP8Q99708 897 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 PARP12Q9H0J9 701 aaKnown RBP3.62□□□□□ -1.83
CPSF6-206ENST00000550987 METTL9Q9H1A3 318 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 TRABDQ9H4I3 376 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 ZSCAN16Q9H4T2 348 aaPredicted RBP3.62□□□□□ -1.83
CPSF6-206ENST00000550987 ISYNA1Q9NPH2 558 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 RMND1Q9NWS8 449 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 RPS6KB2Q9UBS0 482 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 GUCA1BQ9UMX6 200 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 HS3ST2Q9Y278 367 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 ARL2BPQ9Y2Y0 163 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 USH1CQ9Y6N9 552 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 FREM1Q5H8C1 2179 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 DOCK10Q96BY6 2186 aa3.62□□□□□ -1.83
CPSF6-206ENST00000550987 ALMS1Q8TCU4 4167 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 A0A0D9SEW6 157 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 A0A1B0GV72 72 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 SLC5A10A0PJK1 596 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 PLAC8L1A1L4L8 177 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 MIF4GDA9UHW6 222 aaKnown RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 HACD1B0YJ81 288 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 C9J4A7 227 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 M0QXV9 152 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 SULT1C2O00338 296 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 NDUFA2O43678 99 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 NOS1APO75052 506 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 SS18L1O75177 396 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 GLSO94925 669 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 HLA-AP01891 365 aaKnown RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 ORM1P02763 201 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 CDK1P06493 297 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 HIST1H1CP16403 213 aaKnown RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 ZNF17P17021 662 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 MYL9P24844 172 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 CASP1P29466 404 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 RPS10P46783 165 aaKnown RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 PRLHRP49683 370 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 LHX2P50458 406 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 TAS2R60P59551 318 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 UBE2KP61086 200 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms