RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CCL11P51671 97 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 TEPPQ6URK8 271 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 C9orf40Q8IXQ3 194 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 RASL10BQ96S79 203 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 MRPL18Q9H0U6 180 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 PROCRQ9UNN8 238 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 ARID2Q68CP9 1835 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 OOEPA6NGQ2 149 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 HERPUD1Q15011 391 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 OR2M7Q8NG81 312 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 OR2Z1Q8NG97 314 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 CACNA1EQ15878 2313 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 C4orf51C9J302 202 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 KBTBD11O94819 623 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 IGHV3-13P01766 116 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 IGHV3-7P01780 117 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 COL9A1P20849 921 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 COL8A1P27658 744 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 ZNF124Q15973 351 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 OR2H1Q9GZK4 316 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 RBKSQ9H477 322 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 DMRTA1Q5VZB9 504 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 SARAFQ96BY9 339 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 MISP3Q96FF7 219 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 IGSF23A1L1A6 192 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 OR5A2Q8NGI9 324 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 ADTRPQ96IZ2 230 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 G6PC2Q9NQR9 355 aa13.72□□□□□ -0.21
RBFOX1-212ENST00000550418 A0A1B0GTI1 187 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 DHRS7CA6NNS2 312 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 J3QT63 122 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 RBP4P02753 201 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 RNPS1Q15287 305 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 SLC25A28Q96A46 364 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 PARLQ9H300 379 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 PILRAQ9UKJ1 303 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 HLA-DQA1P01909 254 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 SRSF3P84103 164 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 TMEM187Q14656 261 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 LY6G6FQ5SQ64 297 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 RHBDD2Q6NTF9 364 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 M0R1B8 84 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 NPY1RP25929 384 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 CTAG1AP78358 180 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
RBFOX1-212ENST00000550418 A0A1W2PN81 502 aa13.71□□□□□ -0.22
RBFOX1-212ENST00000550418 FBLL1A6NHQ2 334 aaKnown RBP13.71□□□□□ -0.22
RBFOX1-212ENST00000550418 CCL7P80098 99 aa13.71□□□□□ -0.22
RBFOX1-212ENST00000550418 RIGQ13278 110 aa13.71□□□□□ -0.22
RBFOX1-212ENST00000550418 OR8G5Q8NG78 346 aa13.71□□□□□ -0.22
RBFOX1-212ENST00000550418 UCN2Q96RP3 112 aa13.71□□□□□ -0.22
RBFOX1-212ENST00000550418 FOXJ2Q9P0K8 574 aa13.71□□□□□ -0.22
RBFOX1-212ENST00000550418 RBBP6Q7Z6E9 1792 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 IGKV1D-42A0A075B6H8 117 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 CDIPTO14735 213 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 IL11P20809 199 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 NDUFAF3Q9BU61 184 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 FGF16O43320 207 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 SRP19P09132 144 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 ALKBH6Q3KRA9 238 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 BIVMQ86UB2 503 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 RNF122Q9H9V4 155 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 SAP30LQ9HAJ7 183 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 TMEM38BQ9NVV0 291 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 EP300Q09472 2414 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 CEP250Q9BV73 2442 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 CACNA1DQ01668 2161 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 A0A087WWC5 75 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 TMEM250H0YL14 139 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 SCTP09683 121 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 SLC23A3Q6PIS1 610 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 GPR146Q96CH1 333 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 SPRY3O43610 288 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 IFI6P09912 130 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 MRPS11P82912 194 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 SELENOHQ8IZQ5 122 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 ABHD14AQ9BUJ0 271 aa13.7□□□□□ -0.22
RBFOX1-212ENST00000550418 SVILO95425 2214 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 MPDU1O75352 247 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 ZNF766Q5HY98 468 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 TMEM92Q6UXU6 159 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 ZNF721Q8TF20 911 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 GABRG3Q99928 467 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 REG4Q9BYZ8 158 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 RPRMQ9NS64 109 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 MELTFP08582 738 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 LINC00596Q86U02 117 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 MARS2Q96GW9 593 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 S100A4P26447 101 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 FAM27BQ5VT28 67 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 SSX8Q7RTT4 187 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 OR8A1Q8NGG7 326 aa13.69□□□□□ -0.22
RBFOX1-212ENST00000550418 Q8WTZ3 238 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms