RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 IGHV1-46P01743 117 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 MUC1P15941 1255 aaPredicted RBP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 NKX2-1P43699 371 aaPredicted RBP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 BLOC1S1P78537 153 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 ATXN7L3Q14CW9 347 aaPredicted RBP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 EFNB3Q15768 340 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 TMEM108Q6UXF1 575 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 C22orf34Q6ZV56 151 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 OR2C3Q8N628 320 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 SNRNP40Q96DI7 357 aaKnown RBP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 MRPL37Q9BZE1 423 aaKnown RBP8.33□□□□□ -1.08
RAB5B-206ENST00000549505 MSL2Q9HCI7 577 aa8.33□□□□□ -1.08
RAB5B-206ENST00000549505 HSD17B6O14756 317 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 NDUFA2O43678 99 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 SCAF4O95104 1147 aaKnown RBP8.32□□□□□ -1.08
RAB5B-206ENST00000549505 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 DANCRP0C864 163 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 SELLP14151 372 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 CEACAM6P40199 344 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 LOXL3P58215 753 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 S100A10P60903 97 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 RBPJQ06330 500 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 FAM27E3Q08E93 113 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 GNMTQ14749 295 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 RPL7L1Q6DKI1 246 aaKnown RBP8.32□□□□□ -1.08
RAB5B-206ENST00000549505 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 TANC2Q9HCD6 1990 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 LAMP3Q9UQV4 416 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 CARHSP1Q9Y2V2 147 aaKnown RBP8.32□□□□□ -1.08
RAB5B-206ENST00000549505 STRAPQ9Y3F4 350 aaKnown RBP8.32□□□□□ -1.08
RAB5B-206ENST00000549505 F8W036 122 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 ADAM20O43506 726 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 PVALBP20472 110 aaPredicted RBP8.32□□□□□ -1.08
RAB5B-206ENST00000549505 BRWD1-AS2P59051 145 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 EWSR1Q01844 656 aaKnown RBP eCLIP8.32□□□□□ -1.08
RAB5B-206ENST00000549505 MIDNQ504T8 468 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 BEX5Q5H9J7 111 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 KRBOX4Q5JUW0 171 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 ATRAIDQ6UW56 229 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 DPPA3Q6W0C5 159 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 SPAG16Q8N0X2 631 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 OR2Z1Q8NG97 314 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 C14orf79Q96F83 325 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 OR2V2Q96R30 315 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 HSD17B10Q99714 261 aaKnown RBP8.32□□□□□ -1.08
RAB5B-206ENST00000549505 GCM1Q9NP62 436 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 CACFD1Q9UGQ2 172 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 DNAJC13O75165 2243 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 BORCS7-ASMTA0A0B4J1R7 106 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 HSPB6O14558 160 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 TXNL1O43396 289 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 DEFA5Q01523 94 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 GFRALQ6UXV0 394 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF788Q6ZQV5 615 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 C8orf31Q8N9H6 132 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 ST6GALNAC3Q8NDV1 305 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 OR1L1Q8NH94 360 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 SCRT1Q9BWW7 348 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 RNF7Q9UBF6 113 aa8.32□□□□□ -1.08
RAB5B-206ENST00000549505 ODAMA1E959 279 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 DPRXA6NFQ7 191 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 PPIHO43447 177 aaKnown RBP8.31□□□□□ -1.08
RAB5B-206ENST00000549505 KCNAB3O43448 404 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF273Q14593 569 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 TMEM252Q8N6L7 170 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF596Q8TC21 504 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 CD300LFQ8TDQ1 290 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 OR6C3Q9NZP0 311 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 IGSF23A1L1A6 192 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 FAM157AC9JC47 383 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 ABCD4O14678 606 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 TMEM50AO95807 157 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 CD5P06127 495 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 SELENOVP59797 346 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 PJVKQ0ZLH3 352 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 ADIPOQQ15848 244 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 NCMAPQ5T1S8 102 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 CENPVQ7Z7K6 275 aaPredicted RBP8.31□□□□□ -1.08
RAB5B-206ENST00000549505 CISD2Q8N5K1 135 aaKnown RBP8.31□□□□□ -1.08
RAB5B-206ENST00000549505 BOLLQ8N9W6 283 aaKnown RBP8.31□□□□□ -1.08
RAB5B-206ENST00000549505 OR13A1Q8NGR1 328 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 ARL11Q969Q4 196 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 DCAF16Q9NXF7 216 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 HSPB7Q9UBY9 170 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 MLXQ9UH92 298 aa8.31□□□□□ -1.08
RAB5B-206ENST00000549505 LSM5Q9Y4Y9 91 aaKnown RBP8.31□□□□□ -1.08
RAB5B-206ENST00000549505 RAB29O14966 203 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 GFRA3O60609 400 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 CAV2P51636 162 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF266Q14584 549 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 FAM74A1Q5RGS3 127 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 TMEM88Q6PEY1 159 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF439Q8NDP4 499 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 OR1S2Q8NGQ3 325 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 SMDT1Q9H4I9 107 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 ESPL1Q14674 2120 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms