RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 GABARAPL2P60520 117 aa3□□□□□ -1.93
APAF1-208ENST00000549007 TNFAIP6P98066 277 aaPredicted RBP3□□□□□ -1.93
APAF1-208ENST00000549007 MAB21L1Q13394 359 aa3□□□□□ -1.93
APAF1-208ENST00000549007 OR8B8Q15620 311 aa3□□□□□ -1.93
APAF1-208ENST00000549007 SSX1Q16384 188 aa3□□□□□ -1.93
APAF1-208ENST00000549007 ANGPTL5Q86XS5 388 aa3□□□□□ -1.93
APAF1-208ENST00000549007 OR5AU1Q8NGC0 362 aa3□□□□□ -1.93
APAF1-208ENST00000549007 OR8S1Q8NH09 359 aa3□□□□□ -1.93
APAF1-208ENST00000549007 YIPF5Q969M3 257 aa3□□□□□ -1.93
APAF1-208ENST00000549007 SMIM19Q96E16 107 aa3□□□□□ -1.93
APAF1-208ENST00000549007 MRPL48Q96GC5 212 aaKnown RBP3□□□□□ -1.93
APAF1-208ENST00000549007 PGLYRP3Q96LB9 341 aa3□□□□□ -1.93
APAF1-208ENST00000549007 MGLLQ99685 303 aa3□□□□□ -1.93
APAF1-208ENST00000549007 RNF167Q9H6Y7 350 aa3□□□□□ -1.93
APAF1-208ENST00000549007 SCRT2Q9NQ03 307 aa3□□□□□ -1.93
APAF1-208ENST00000549007 TMEM100Q9NV29 134 aa3□□□□□ -1.93
APAF1-208ENST00000549007 TAS2R4Q9NYW5 299 aa3□□□□□ -1.93
APAF1-208ENST00000549007 TEP1Q99973 2627 aaKnown RBP3□□□□□ -1.93
APAF1-208ENST00000549007 TRAV8-7A0A075B6U6 113 aa3□□□□□ -1.93
APAF1-208ENST00000549007 IQCF6A8MYZ5 107 aa3□□□□□ -1.93
APAF1-208ENST00000549007 TNFSF12O43508 249 aa3□□□□□ -1.93
APAF1-208ENST00000549007 TNFAIP8O95379 198 aa3□□□□□ -1.93
APAF1-208ENST00000549007 CYB5R3P00387 301 aaPredicted RBP3□□□□□ -1.93
APAF1-208ENST00000549007 OCM2P0CE71 109 aa3□□□□□ -1.93
APAF1-208ENST00000549007 ZNF44P15621 663 aa3□□□□□ -1.93
APAF1-208ENST00000549007 RPS11P62280 158 aaKnown RBP eCLIP3□□□□□ -1.93
APAF1-208ENST00000549007 LSM3P62310 102 aaKnown RBP3□□□□□ -1.93
APAF1-208ENST00000549007 KIAA0141Q14154 515 aaPredicted RBP3□□□□□ -1.93
APAF1-208ENST00000549007 DEFB113Q30KQ7 82 aa3□□□□□ -1.93
APAF1-208ENST00000549007 RPL22L1Q6P5R6 122 aaKnown RBP3□□□□□ -1.93
APAF1-208ENST00000549007 BTNL3Q6UXE8 466 aa3□□□□□ -1.93
APAF1-208ENST00000549007 GVQW1Q8N7I0 195 aa3□□□□□ -1.93
APAF1-208ENST00000549007 DEFB108BQ8NET1 73 aa3□□□□□ -1.93
APAF1-208ENST00000549007 WFDC11Q8NEX6 87 aa3□□□□□ -1.93
APAF1-208ENST00000549007 CCL17Q92583 94 aa3□□□□□ -1.93
APAF1-208ENST00000549007 SLC30A2Q9BRI3 323 aa3□□□□□ -1.93
APAF1-208ENST00000549007 COMMD4Q9H0A8 199 aa3□□□□□ -1.93
APAF1-208ENST00000549007 MOB1AQ9H8S9 216 aa3□□□□□ -1.93
APAF1-208ENST00000549007 Q9HAA7 133 aa3□□□□□ -1.93
APAF1-208ENST00000549007 EXOSC4Q9NPD3 245 aaKnown RBP3□□□□□ -1.93
APAF1-208ENST00000549007 HHLA2Q9UM44 414 aa3□□□□□ -1.93
APAF1-208ENST00000549007 AKAP9Q99996 3911 aa3□□□□□ -1.93
APAF1-208ENST00000549007 MTORP42345 2549 aa3□□□□□ -1.93
APAF1-208ENST00000549007 ZANQ9Y493 2812 aa3□□□□□ -1.93
APAF1-208ENST00000549007 IGKV1-27A0A075B6S5 117 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 IGHV3OR15-7A0A075B7D8 119 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 IGKV1-9A0A0C4DH69 117 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 LOC100506127A0A0U1RQW1 187 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 ZNF816-ZNF321PA0A0X1KG74 233 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 TMEM212A6NML5 194 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 PIN1P1O15428 100 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 GMDSO60547 372 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 RHBDL1O75783 438 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 NRASP01111 189 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 IGLV2-11P01706 119 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 IGLV3-1P01715 115 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 MAS1P04201 325 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 UBCP0CG48 685 aaKnown RBP2.99□□□□□ -1.93
APAF1-208ENST00000549007 CD80P33681 288 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 PMELP40967 661 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 TGM4P49221 684 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 PPT1P50897 306 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 RIPPLY1Q0D2K3 151 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 CHD3Q12873 2000 aaKnown RBP2.99□□□□□ -1.93
APAF1-208ENST00000549007 TMEM244Q5VVB8 128 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 TMEM17Q86X19 198 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 PHC2Q8IXK0 858 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 OR13G1Q8NGZ3 307 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 RFESDQ8TAC1 157 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 UFD1Q92890 307 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 TMEM106AQ96A25 262 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 CYYR1Q96J86 154 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 RNF170Q96K19 258 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 NAA50Q9GZZ1 169 aaKnown RBP2.99□□□□□ -1.93
APAF1-208ENST00000549007 OR51E2Q9H255 320 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 SP140LQ9H930 580 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 CELSR1Q9NYQ6 3014 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 MBD2Q9UBB5 411 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 ENPP5Q9UJA9 477 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 V9GYS6 101 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 OTOGQ6ZRI0 2925 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 SONP18583 2426 aaKnown RBP2.99□□□□□ -1.93
APAF1-208ENST00000549007 LOC105371242A0A075B767 164 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 IGHV4-30-2A0A087WSY4 118 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 A0A087X002 238 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 IGHV3-38A0A0C4DH36 116 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 A0A1B0GUV1 79 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 ISPDA4D126 451 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 NKX6-3A6NJ46 265 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 BMPR1BO00238 502 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 CDIPTO14735 213 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 AKR7A2O43488 359 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 SYNGR1O43759 233 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 ANGPTL7O43827 346 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 NXPH4O95158 308 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 OCMP0CE72 109 aaPredicted RBP2.99□□□□□ -1.93
APAF1-208ENST00000549007 CCL1P22362 96 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 GADD45AP24522 165 aa2.99□□□□□ -1.93
APAF1-208ENST00000549007 NDUFV3P56181 108 aaKnown RBP2.99□□□□□ -1.93
APAF1-208ENST00000549007 GNB1P62873 340 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms