RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 OGG1O15527 345 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 SC5DO75845 299 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 HBZP02008 142 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 GLAP06280 429 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 MAP2K4P45985 399 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 ZNF616Q08AN1 781 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 UBE2UQ5VVX9 321 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 TMEM65Q6PI78 240 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 ZNF367Q7RTV3 350 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 GPR141Q7Z602 305 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 ZNF554Q86TJ5 538 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 ZNF429Q86V71 674 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 CDH26Q8IXH8 852 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 ETAA1Q9NY74 926 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 CKLFQ9UBR5 152 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 SMAD5-AS1Q9Y6J3 95 aa10.01□□□□□ -0.81
PTCH1-218ENST00000548945 LYSTQ99698 3801 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 DYNC2H1Q8NCM8 4307 aaKnown RBP10□□□□□ -0.81
PTCH1-218ENST00000548945 HUWE1Q7Z6Z7 4374 aaKnown RBP10□□□□□ -0.81
PTCH1-218ENST00000548945 TRBV5-5A0A0J9YX44 114 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 A0A1W2PP11 408 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 IGLV1-40P01703 118 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 HLA-DRB1P01911 266 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 FSTP19883 344 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 ETV1P50549 477 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 KIAA0141Q14154 515 aaPredicted RBP10□□□□□ -0.81
PTCH1-218ENST00000548945 MMDQ15546 238 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 LY6G6FQ5SQ64 297 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 RAB12Q6IQ22 244 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 ZNF491Q8N8L2 437 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 OR1N2Q8NGR9 330 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 BABAM2Q9NXR7 383 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
PTCH1-218ENST00000548945 SLC2A2P11168 524 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-218ENST00000548945 PSMB9P28065 219 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 Q499Y3 187 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 MORN2Q502X0 79 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 YIF1BQ5BJH7 314 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 FAM27D1Q5T7N8 215 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 OR2G6Q5TZ20 316 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 NANOGP1Q8N7R0 232 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 OR13F1Q8NGS4 319 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 OR4K15Q8NH41 348 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 OR1L1Q8NH94 360 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 GHSRQ92847 366 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 ASCL2Q99929 193 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 KLK15Q9H2R5 256 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 OR51J1Q9H342 316 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 GNB4Q9HAV0 340 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 OR2S2Q9NQN1 319 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 MBNL3Q9NUK0 354 aaKnown RBP9.99□□□□□ -0.81
PTCH1-218ENST00000548945 MRPS28Q9Y2Q9 187 aaKnown RBP9.99□□□□□ -0.81
PTCH1-218ENST00000548945 PEX16Q9Y5Y5 336 aa9.99□□□□□ -0.81
PTCH1-218ENST00000548945 ATP6V0E1O15342 81 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 LY86O95711 162 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 RCC1P18754 421 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-218ENST00000548945 FUT3P21217 361 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 RAB9AP51151 201 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 WNT4P56705 351 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 ACTBP60709 375 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 RPS11P62280 158 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTCH1-218ENST00000548945 HTD2P86397 168 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 SPHARQ15513 63 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 MED22Q15528 200 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 C5orf64Q2M2E5 130 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 DMKNQ6E0U4 476 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-218ENST00000548945 GLIPR1L1Q6UWM5 242 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 PRR18Q8N4B5 295 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 MINDY2Q8NBR6 621 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 MUC7Q8TAX7 377 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 ORAI1Q96D31 301 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 ZNF251Q9BRH9 671 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 ABHD14AQ9BUJ0 271 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 TAF9BQ9HBM6 251 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 KCNIP1Q9NZI2 227 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 CLEC2DQ9UHP7 191 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 JPT1Q9UK76 154 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 LSM2Q9Y333 95 aaKnown RBP9.98□□□□□ -0.81
PTCH1-218ENST00000548945 WSB1Q9Y6I7 421 aa9.98□□□□□ -0.81
PTCH1-218ENST00000548945 TRAV8-7A0A075B6U6 113 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 TRBV5-7A0A0A0MS05 114 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 IGHV7-81A0A0B4J1V7 117 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 TRAV41A0A0B4J266 112 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 G3V318 75 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 OVOL1O14753 267 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 NBR2O15453 112 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 YPEL1O60688 119 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 RGS11O94810 467 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 NDUFA3O95167 84 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 LALBAP00709 142 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 MGMTP16455 207 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-218ENST00000548945 GNB1P62873 340 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 ODF3L1Q8IXM7 274 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 JAGN1Q8N5M9 183 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 NPBQ8NG41 125 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 OR13C5Q8NGS8 318 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms