RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 M0R1X1 148 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 MSMO1Q15800 293 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF737O75373 536 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 OR2H2O95918 312 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 MMP7P09237 267 aaPredicted RBP12.1□□□□□ -0.47
CACNB3-209ENST00000548860 PRB4P10163 310 aaPredicted RBP12.1□□□□□ -0.47
CACNB3-209ENST00000548860 SLC25A6P12236 298 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 PSMB3P49720 205 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 S100A12P80511 92 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF766Q5HY98 468 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 FAM201AQ5SY85 155 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 NCR3LG1Q68D85 454 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 PROK2Q9HC23 129 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 TAAR3PQ9P1P4 343 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 SPAARA0A1B0GVQ0 90 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 IGHEP01854 428 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 APELAP0DMC3 54 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 FGF12P61328 243 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF66Q6ZN08 573 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 GGNQ86UU5 652 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 C1orf87Q8N0U7 546 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 OR4C12Q96R67 309 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 Q9N2K0 584 aa12.1□□□□□ -0.47
CACNB3-209ENST00000548860 DSPP15924 2871 aaKnown RBP12.1□□□□□ -0.47
CACNB3-209ENST00000548860 A0A0G2JRQ6 117 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 LRRC3CA6NJW4 275 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 COLCA2A8K830 154 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 LINC01387J3KSC0 135 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 M0R1B8 84 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
CACNB3-209ENST00000548860 HLA-DRB3P79483 266 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 CATR1Q13166 79 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 OR8B8Q15620 311 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 PINX1Q96BK5 328 aaKnown RBP12.09□□□□□ -0.47
CACNB3-209ENST00000548860 SRSF6Q13247 344 aaKnown RBP12.09□□□□□ -0.47
CACNB3-209ENST00000548860 SLC25A53Q5H9E4 307 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF385CQ66K41 422 aaPredicted RBP12.09□□□□□ -0.47
CACNB3-209ENST00000548860 CARHSP1Q9Y2V2 147 aaKnown RBP12.09□□□□□ -0.47
CACNB3-209ENST00000548860 LY6G6EA0A0G2JKS1 128 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 GAPDHP04406 335 aaKnown RBP12.09□□□□□ -0.47
CACNB3-209ENST00000548860 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 SSTR5P35346 364 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 ERVK-16P61578 105 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 POM121Q96HA1 1249 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 ATP5SQ99766 215 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
CACNB3-209ENST00000548860 U3KQA8 63 aa12.09□□□□□ -0.47
CACNB3-209ENST00000548860 PPP5D1E7EU14 171 aa12.08□□□□□ -0.47
CACNB3-209ENST00000548860 CRYGSP22914 178 aa12.08□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF383Q8NA42 475 aa12.08□□□□□ -0.47
CACNB3-209ENST00000548860 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.47
CACNB3-209ENST00000548860 DOK5Q9P104 306 aa12.08□□□□□ -0.47
CACNB3-209ENST00000548860 KLF13Q9Y2Y9 288 aaPredicted RBP12.08□□□□□ -0.47
CACNB3-209ENST00000548860 PAGE4O60829 102 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 CDS2O95674 445 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 CCL1P22362 96 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 GPR12P47775 334 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 OR13D1Q8NGV5 346 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 TMEM100Q9NV29 134 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 HSPB1P04792 205 aaKnown RBP12.08□□□□□ -0.48
CACNB3-209ENST00000548860 NDUFB7P17568 137 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 FAM3BP58499 235 aaPredicted RBP12.08□□□□□ -0.48
CACNB3-209ENST00000548860 POLDIP2Q9Y2S7 368 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 LNP1A1A4G5 178 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 KCNMB1Q16558 191 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 RALYQ9UKM9 306 aaKnown RBP12.08□□□□□ -0.48
CACNB3-209ENST00000548860 ATP23Q9Y6H3 246 aa12.08□□□□□ -0.48
CACNB3-209ENST00000548860 ZGRF1Q86YA3 2104 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 TMEM50AO95807 157 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 FGFRL1Q8N441 504 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 DEFB124Q8NES8 71 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 PLEKHA3Q9HB20 300 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 LIN7CQ9NUP9 197 aaKnown RBP12.07□□□□□ -0.48
CACNB3-209ENST00000548860 MED12LQ86YW9 2145 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 GLIPR1P48060 266 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 RPS23P62266 143 aaKnown RBP12.07□□□□□ -0.48
CACNB3-209ENST00000548860 SLC35B1P78383 322 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 RNF212Q495C1 297 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 LYPD6Q86Y78 171 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 SCCPDHQ8NBX0 429 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 OR10G4Q8NGN3 311 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 OR10G9Q8NGN4 311 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 GATAD1Q8WUU5 269 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 ZNF320A2RRD8 509 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 CYTIPO60759 359 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 CLN5O75503 358 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 H1FXQ92522 213 aaKnown RBP12.07□□□□□ -0.48
CACNB3-209ENST00000548860 MALSU1Q96EH3 234 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms