RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 VSIG8P0DPA2 414 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 ACTBP60709 375 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 HMGN3Q15651 99 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 UNQ9370/PRO34162Q6UXP9 181 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 ZNF833PQ6ZTB9 187 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 LRRTM1Q86UE6 522 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 BPIFB6Q8NFQ5 453 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 OR5M8Q8NGP6 311 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 NABP2Q9BQ15 211 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 IFI27L2Q9H2X8 130 aa13.58□□□□□ -0.24
CHMP1A-205ENST00000548650 SAA2-SAA4A0A096LPE2 208 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 YPEL1O60688 119 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 HLA-DRB1P01911 266 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 SAA2P0DJI9 122 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 OR5H8P0DN80 308 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 CNTFRP26992 372 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 PPIFP30405 207 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 OR3A3P47888 321 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 RPS27AP62979 156 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 LY6G6FQ5SQ64 297 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 OR10K2Q6IF99 312 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 SVOPQ8N4V2 548 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 RITA1Q96K30 269 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 YPEL2Q96QA6 119 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 KCNK15Q9H427 330 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 ZMAT5Q9UDW3 170 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 ERGIC3Q9Y282 383 aa13.57□□□□□ -0.24
CHMP1A-205ENST00000548650 ATP6V0E1O15342 81 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 NBR2O15453 112 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 RAMP3O60896 148 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 UNC119Q13432 240 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 ACSM3Q53FZ2 586 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 RBM48Q5RL73 367 aaKnown RBP13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 C1orf100Q5SVJ3 147 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 C9orf66Q5T8R8 295 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 C6orf201Q7Z4U5 140 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 PHYHIPQ92561 330 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 GALMQ96C23 342 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 NEDD4LQ96PU5 975 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 NICN1Q9BSH3 213 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 TMEM59Q9BXS4 323 aa13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 LSM2Q9Y333 95 aaKnown RBP13.56□□□□□ -0.24
CHMP1A-205ENST00000548650 IGHV7-81A0A0B4J1V7 117 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 G3V318 75 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 RGS11O94810 467 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 NAPSAO96009 420 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 CDK1P06493 297 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 NDPQ00604 133 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 KIAA0141Q14154 515 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 C5orf64Q2M2E5 130 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 RNLSQ5VYX0 342 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 OR2AK2Q8NG84 335 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 ZNF251Q9BRH9 671 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 CHCHD6Q9BRQ6 235 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 FAAP24Q9BTP7 215 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 TMED9Q9BVK6 235 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 MND1Q9BWT6 205 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 TM2D1Q9BX74 207 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 KLK15Q9H2R5 256 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 OR51J1Q9H342 316 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 GNB4Q9HAV0 340 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 PARP11Q9NR21 331 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 WSB1Q9Y6I7 421 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 STAB2Q8WWQ8 2551 aa13.55□□□□□ -0.24
CHMP1A-205ENST00000548650 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 SLC22A1O15245 554 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 NDUFA3O95167 84 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 IGLV1-40P01703 118 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 HTR2CP28335 458 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 BLVRBP30043 206 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 QRFPP83859 136 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 GLT8D1Q68CQ7 371 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 FAM71F2Q6NXP2 309 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 ZNF880Q6PDB4 577 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 MS4A15Q8N5U1 240 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 NPBQ8NG41 125 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 UBE2E2Q96LR5 201 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 PRR25Q96S07 402 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 SCOCQ9UIL1 159 aa13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 LSM4Q9Y4Z0 139 aaKnown RBP13.54□□□□□ -0.24
CHMP1A-205ENST00000548650 A0A0A6YYD4 124 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 TMEM14DPA8MWL7 114 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 I3L521 148 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 ST8SIA5O15466 376 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 CD37P11049 281 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 RUNX1Q01196 453 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 C19orf54Q5BKX5 351 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 FAM131AQ6UXB0 335 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 MOB1BQ7L9L4 216 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 OR11H1Q8NG94 326 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 KCNG3Q8TAE7 436 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 IL1F10Q8WWZ1 152 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 WWC2-AS2Q96NR7 200 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 PARP12Q9H0J9 701 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 ABRACLQ9P1F3 81 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 NKX1-2Q9UD57 310 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms