RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SUCNR1Q9BXA5 334 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 TMEM133Q9H2Q1 129 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 NOTCH2Q04721 2471 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 METTL11BQ5VVY1 283 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 PLET1Q6UQ28 207 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 OR2AK2Q8NG84 335 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 MARCH1Q8TCQ1 289 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 FAM216AQ8WUB2 273 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 LEAP2Q969E1 77 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 NUBP2Q9Y5Y2 271 aa23.56■■□□□ 1.36
BRF1-213ENST00000548421 IGKV1D-13A0A0B4J2D9 117 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 IGHV3-7P01780 117 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 IGKV1-13P0DP09 117 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 LUMP51884 338 aaPredicted RBP23.55■■□□□ 1.36
BRF1-213ENST00000548421 SURF2Q15527 256 aaPredicted RBP23.55■■□□□ 1.36
BRF1-213ENST00000548421 TMEM249Q2WGJ8 235 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 UTF1Q5T230 341 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 CCBE1Q6UXH8 406 aaPredicted RBP23.55■■□□□ 1.36
BRF1-213ENST00000548421 SCGB3A2Q96PL1 93 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 C20orf85Q9H1P6 137 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 NUDT15Q9NV35 164 aa23.55■■□□□ 1.36
BRF1-213ENST00000548421 RBM7Q9Y580 266 aaKnown RBP23.55■■□□□ 1.36
BRF1-213ENST00000548421 TRAV20A0A0B4J274 112 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 ITGB1BP1O14713 200 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 UCP3P55916 312 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 CENPSQ8N2Z9 138 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 ZDHHC22Q8N966 263 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 ZNF439Q8NDP4 499 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 ABHD14AQ9BUJ0 271 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 SIRPDQ9H106 197 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 MMP28Q9H239 520 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 ITGB1BP2Q9UKP3 347 aa23.54■■□□□ 1.36
BRF1-213ENST00000548421 OR8U9P0C7N5 309 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 PGAM2P15259 253 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 PRTN3P24158 256 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 OR8U1Q8NH10 309 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 SECTM1Q8WVN6 248 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 UPRTQ96BW1 309 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 UNKLQ9H9P5 680 aaKnown RBP23.53■■□□□ 1.36
BRF1-213ENST00000548421 SIRT7Q9NRC8 400 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 PSG11Q9UQ72 335 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 VSIG4Q9Y279 399 aa23.53■■□□□ 1.36
BRF1-213ENST00000548421 IGHV4-31P0DP07 118 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 CD34P28906 385 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 GZMKP49863 264 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 GNG10P50151 68 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 RAB7AP51149 207 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 ZNF134P52741 427 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 PAX8Q06710 450 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 BAMBIQ13145 260 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 LPCAT3Q6P1A2 487 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 VMO1Q7Z5L0 202 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 LDLRAD3Q86YD5 345 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 SLC38A6Q8IZM9 456 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 TMEM186Q96B77 213 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 CREB3L1Q96BA8 519 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 MSI2Q96DH6 328 aaKnown RBP23.52■■□□□ 1.36
BRF1-213ENST00000548421 SLC5A7Q9GZV3 580 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 GPR132Q9UNW8 380 aa23.52■■□□□ 1.36
BRF1-213ENST00000548421 TRAV6A0A075B6T7 132 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 ST8SIA5O15466 376 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 TOX4O94842 621 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 MMP9P14780 707 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 CT45A1Q5HYN5 189 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 DCAF12L2Q5VW00 463 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 ABHD12Q8N2K0 398 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 C8orf31Q8N9H6 132 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 CT45A3Q8NHU0 189 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 ZFAND1Q8TCF1 268 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 AGMATQ9BSE5 352 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 HIF1ANQ9NWT6 349 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 FLVCR2Q9UPI3 526 aa23.51■■□□□ 1.35
BRF1-213ENST00000548421 MYO9AB2RTY4 2548 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 IGHV2-26A0A0B4J1V2 119 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 ARPC1BO15143 372 aaKnown RBP23.5■■□□□ 1.35
BRF1-213ENST00000548421 SLC31A2O15432 143 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 GATA3P23771 443 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 DLX1P56177 255 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 SLC25A48Q6ZT89 311 aaKnown RBP23.5■■□□□ 1.35
BRF1-213ENST00000548421 OR13D1Q8NGV5 346 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 OR9G1Q8NH87 305 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 CLEC7AQ9BXN2 247 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 OR2D2Q9H210 308 aa23.5■■□□□ 1.35
BRF1-213ENST00000548421 ZNF469Q96JG9 3925 aaPredicted RBP23.5■■□□□ 1.35
BRF1-213ENST00000548421 A0A1W2PPE3 182 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 RLN1P04808 185 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 H2AFB2P0C5Z0 115 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 MARVELD1Q9BSK0 173 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 PCGF1Q9BSM1 259 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 RSRP1Q9BUV0 290 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 IFI27L2Q9H2X8 130 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 HEXA-AS1Q9H8Q6 139 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 KCNS2Q9ULS6 477 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 C14orf166Q9Y224 244 aaKnown RBP23.49■■□□□ 1.35
BRF1-213ENST00000548421 FLNAP21333 2647 aaKnown RBP23.49■■□□□ 1.35
BRF1-213ENST00000548421 J3QR06 171 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 ZNF645Q8N7E2 425 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 ZNF596Q8TC21 504 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 TNFRSF14Q92956 283 aa23.49■■□□□ 1.35
BRF1-213ENST00000548421 ZNF486Q96H40 463 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms