RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 KIAA0141Q14154 515 aaPredicted RBP10.43□□□□□ -0.74
CPSF6-204ENST00000547486 SPHARQ15513 63 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 CXorf66Q5JRM2 361 aaPredicted RBP10.43□□□□□ -0.74
CPSF6-204ENST00000547486 CEACAM19Q7Z692 300 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 ZNF554Q86TJ5 538 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 PHYHIPQ92561 330 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 THRSPQ92748 146 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 KCTD7Q96MP8 289 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 NEDD4LQ96PU5 975 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 YPEL2Q96QA6 119 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 ABHD14AQ9BUJ0 271 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 MCRIP2Q9BUT9 160 aaKnown RBP10.43□□□□□ -0.74
CPSF6-204ENST00000547486 MND1Q9BWT6 205 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 GPR61Q9BZJ8 451 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 ZNF107Q9UII5 783 aaPredicted RBP10.43□□□□□ -0.74
CPSF6-204ENST00000547486 COL7A1Q02388 2944 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 A0A0A6YYD4 124 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 TMEM14DPA8MWL7 114 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 G3V318 75 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 RRP9O43818 475 aaKnown RBP10.42□□□□□ -0.74
CPSF6-204ENST00000547486 PSMB8P28062 276 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 ACTBP60709 375 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 IRF3Q14653 427 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 MMDQ15546 238 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 HMGN3Q15651 99 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 LY6G6FQ5SQ64 297 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 VAX1Q5SQQ9 334 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 GLT8D1Q68CQ7 371 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 ZNF833PQ6ZTB9 187 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 DPF1Q92782 380 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 TMEM203Q969S6 136 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 GALMQ96C23 342 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 GFI1Q99684 422 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 TM2D1Q9BX74 207 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 IFI27L2Q9H2X8 130 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 WSB1Q9Y6I7 421 aa10.42□□□□□ -0.74
CPSF6-204ENST00000547486 SAA2-SAA4A0A096LPE2 208 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 SLC22A1O15245 554 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 ST8SIA5O15466 376 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 NAPSAO96009 420 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 UCHL1P09936 223 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 SAA2P0DJI9 122 aaPredicted RBP10.41□□□□□ -0.74
CPSF6-204ENST00000547486 VDAC1P21796 283 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 PPIFP30405 207 aaKnown RBP10.41□□□□□ -0.74
CPSF6-204ENST00000547486 LUMP51884 338 aaPredicted RBP10.41□□□□□ -0.74
CPSF6-204ENST00000547486 MED22Q15528 200 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 HSD17B12Q53GQ0 312 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 RBM48Q5RL73 367 aaKnown RBP10.41□□□□□ -0.74
CPSF6-204ENST00000547486 LIPKQ5VXJ0 399 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 ZNF880Q6PDB4 577 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 TMEM91Q6ZNR0 172 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 OR8U1Q8NH10 309 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 KCNG3Q8TAE7 436 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 NRG4Q8WWG1 115 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 ZNF251Q9BRH9 671 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 TMEM59Q9BXS4 323 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 ANKRD60Q9BZ19 345 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 PARP12Q9H0J9 701 aaKnown RBP10.41□□□□□ -0.74
CPSF6-204ENST00000547486 SCOCQ9UIL1 159 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 ZNF580Q9UK33 172 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 LRRC42Q9Y546 428 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 DNAH9Q9NYC9 4486 aa10.41□□□□□ -0.74
CPSF6-204ENST00000547486 IGHV7-81A0A0B4J1V7 117 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 SOCS1O15524 211 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 RGS11O94810 467 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 BLVRBP30043 206 aaPredicted RBP10.4□□□□□ -0.74
CPSF6-204ENST00000547486 DGCR2P98153 550 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 P2RY14Q15391 338 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 SVOPQ8N4V2 548 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 NPBQ8NG41 125 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 OR2AK2Q8NG84 335 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 C4orf3Q8WVX3 66 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 IL1F10Q8WWZ1 152 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 B9D2Q9BPU9 175 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 HDHD3Q9BSH5 251 aaPredicted RBP10.4□□□□□ -0.74
CPSF6-204ENST00000547486 LPAR5Q9H1C0 372 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 OR51J1Q9H342 316 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 GNB4Q9HAV0 340 aa10.4□□□□□ -0.74
CPSF6-204ENST00000547486 ATP6V0E1O15342 81 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 NBR2O15453 112 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 IGLV1-40P01703 118 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 HLA-DRB1P01911 266 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 CT45A6P0DMU7 189 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 CT45A5P0DMU8 189 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 CT45A7P0DMV0 189 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
CPSF6-204ENST00000547486 AQP4P55087 323 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 TMEM50BP56557 158 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 RPS25P62851 125 aaKnown RBP10.39□□□□□ -0.75
CPSF6-204ENST00000547486 TPBGQ13641 420 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 FHL3Q13643 280 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 C5orf64Q2M2E5 130 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 RPL39P5Q59GN2 51 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 ASPHD1Q5U4P2 390 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 LIN54Q6MZP7 749 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 ZNF491Q8N8L2 437 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 OR11H1Q8NG94 326 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 OR5M8Q8NGP6 311 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms