RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 STRAPQ9Y3F4 350 aaKnown RBP8.41□□□□□ -1.06
TRAF1-203ENST00000546084 A0A087WZY1 265 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 KIAA1324LA8MWY0 1029 aaPredicted RBP8.41□□□□□ -1.06
TRAF1-203ENST00000546084 H3BQ15 152 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 FOLR2P14207 255 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 EGR1P18146 543 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 EWSR1Q01844 656 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRAF1-203ENST00000546084 SSPNQ14714 243 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 FAM201AQ5SY85 155 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 RTL6Q6ICC9 239 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 MRPL14Q6P1L8 145 aaKnown RBP8.41□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF818PQ6ZRF7 136 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 COMMD1Q8N668 190 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF596Q8TC21 504 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 LHX4Q969G2 390 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 CLDN23Q96B33 292 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 ADGRG7Q96K78 797 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 SLC25A31Q9H0C2 315 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 ASCL3Q9NQ33 180 aa8.41□□□□□ -1.06
TRAF1-203ENST00000546084 HEYLQ9NQ87 328 aaPredicted RBP8.41□□□□□ -1.06
TRAF1-203ENST00000546084 IGKV1D-13A0A0B4J2D9 117 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 RBFOX3A6NFN3 312 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 IGKV1-13P0DP09 117 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 G6PCP35575 357 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 Q0VFX4 171 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF239Q16600 458 aaKnown RBP8.4□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF880Q6PDB4 577 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF429Q86V71 674 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 DMRTC2Q8IXT2 367 aaPredicted RBP8.4□□□□□ -1.06
TRAF1-203ENST00000546084 LFNGQ8NES3 379 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 APOBEC3DQ96AK3 386 aaPredicted RBP8.4□□□□□ -1.06
TRAF1-203ENST00000546084 Q96M66 194 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 FAM173AQ9BQD7 235 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 ELOVL1Q9BW60 279 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 LIME1Q9H400 295 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 RNF122Q9H9V4 155 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 DOK5Q9P104 306 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 DMRT1Q9Y5R6 373 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 CLEC18AA5D8T8 446 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 CYB5R3P00387 301 aaPredicted RBP8.4□□□□□ -1.06
TRAF1-203ENST00000546084 FABP4P15090 132 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 RBM11P57052 281 aaKnown RBP8.4□□□□□ -1.06
TRAF1-203ENST00000546084 RPS23P62266 143 aaKnown RBP8.4□□□□□ -1.06
TRAF1-203ENST00000546084 CCL20P78556 96 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 TBC1D28Q2M2D7 210 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 C17orf82Q86X59 251 aaPredicted RBP8.4□□□□□ -1.06
TRAF1-203ENST00000546084 VKORC1L1Q8N0U8 176 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 CLEC18CQ8NCF0 446 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 RAB39BQ96DA2 213 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 IMMP1LQ96LU5 166 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 OR2D2Q9H210 308 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 FBLN5Q9UBX5 448 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 WSB1Q9Y6I7 421 aa8.4□□□□□ -1.06
TRAF1-203ENST00000546084 OR5H1A6NKK0 313 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 M0R1B8 84 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 ACTL6BO94805 426 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 LYL1P12980 280 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 DLK1P80370 383 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF766Q5HY98 468 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 FAM185AQ8N0U4 392 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF610Q8N9Z0 462 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.07
TRAF1-203ENST00000546084 WFIKKN1Q96NZ8 548 aa8.4□□□□□ -1.07
TRAF1-203ENST00000546084 PTPRSQ13332 1948 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 OR8B8Q15620 311 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 REC114Q7Z4M0 266 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 CYB561D1Q8N8Q1 229 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 KCNE4Q8WWG9 221 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 CORO2AQ92828 525 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 TAAR9Q96RI9 348 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF71Q9NQZ8 489 aaPredicted RBP8.39□□□□□ -1.07
TRAF1-203ENST00000546084 CLN8Q9UBY8 286 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF391Q9UJN7 358 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 MED12LQ86YW9 2145 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 MUC22E2RYF6 1773 aaPredicted RBP8.39□□□□□ -1.07
TRAF1-203ENST00000546084 KIR2DS1A0A191URI9 304 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 A0A1W2PNV4 684 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 A0A1W2PPQ1 181 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 DDTP30046 118 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 KIR2DS4P43632 304 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 KIR2DS1Q14954 304 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 PNRC2Q9NPJ4 139 aaKnown RBP8.39□□□□□ -1.07
TRAF1-203ENST00000546084 MYO18BQ8IUG5 2567 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 CRYAAP02489 173 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 TRGC2P03986 189 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 PTTG1IPP53801 180 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 GNG3P63215 75 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 OR52L2PQ8NGH6 319 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 OR4F5Q8NH21 305 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 SLC25A40Q8TBP6 338 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 OR4F4Q96R69 305 aa8.39□□□□□ -1.07
TRAF1-203ENST00000546084 CEACAM18A8MTB9 384 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 DVL1O14640 695 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 TOX3O15405 576 aaPredicted RBP8.38□□□□□ -1.07
TRAF1-203ENST00000546084 FGF5P12034 268 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 RND3P61587 244 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 IL15RAQ13261 267 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms