RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FAM25CB3EWG5 89 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 FAM25GB3EWG6 89 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 TRIM77I1YAP6 450 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 CTDSP2O14595 271 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 DIRAS3O95661 229 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 HLA-DQB1P01920 261 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 ZBTB25P24278 435 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 PLA1AQ53H76 456 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 IGSF11Q5DX21 431 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 LAX1Q8IWV1 398 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 TNFRSF19Q9NS68 423 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 NDUFA13Q9P0J0 144 aa16.52■□□□□ 0.24
HMGA2-211ENST00000545998 OOSP1A8MZH6 123 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 H3BUX3 64 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 RGS5O15539 181 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 KRTAP21-3Q3LHN1 58 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 OR5R1Q8NH85 324 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 PIFOQ8TCI5 191 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 ABHD14AQ9BUJ0 271 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 CHIAQ9BZP6 476 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 NXF2Q9GZY0 626 aaKnown RBP16.51■□□□□ 0.23
HMGA2-211ENST00000545998 HSPA12AO43301 675 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 CEACAM6P40199 344 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 DYNLT3P51808 116 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 DIAPH2-AS1Q14236 149 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 GVQW1Q8N7I0 195 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 OR2AK2Q8NG84 335 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 GCDHQ92947 438 aaPredicted RBP16.51■□□□□ 0.23
HMGA2-211ENST00000545998 ST6GALNAC6Q969X2 333 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 RPEQ96AT9 228 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 DGCR14Q96DF8 476 aaKnown RBP16.51■□□□□ 0.23
HMGA2-211ENST00000545998 DCUN1D5Q9BTE7 237 aa16.51■□□□□ 0.23
HMGA2-211ENST00000545998 PARP12Q9H0J9 701 aaKnown RBP16.51■□□□□ 0.23
HMGA2-211ENST00000545998 TRBV6-7A0A0A0MS04 114 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 BET1O15155 118 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 CBX5P45973 191 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 RAB13P51153 203 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 ZNF137PP52743 207 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 KRTAP24-1Q3LI83 254 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 FOXB2Q5VYV0 432 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 HOGA1Q86XE5 327 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 FAM216AQ8WUB2 273 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 TOMM40LQ969M1 308 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 C6orf62Q9GZU0 229 aaPredicted RBP16.5■□□□□ 0.23
HMGA2-211ENST00000545998 TOLLIPQ9H0E2 274 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 EXTL2Q9UBQ6 330 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 VPREB3Q9UKI3 123 aa16.5■□□□□ 0.23
HMGA2-211ENST00000545998 MRPS7Q9Y2R9 242 aaKnown RBP16.5■□□□□ 0.23
HMGA2-211ENST00000545998 BTBD17A6NE02 478 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 ITGB1BP1O14713 200 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 HSD17B6O14756 317 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 PRSS3P35030 304 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 CCDC144NLQ6NUI1 221 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 C16orf87Q6PH81 154 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 OR10J5Q8NHC4 309 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 MCFD2Q8NI22 146 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 ANXA10Q9UJ72 324 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 ADAM30Q9UKF2 790 aa16.49■□□□□ 0.23
HMGA2-211ENST00000545998 IL3RAP26951 378 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 RAB7AP51149 207 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 ZNF816Q0VGE8 651 aaPredicted RBP16.48■□□□□ 0.23
HMGA2-211ENST00000545998 SNX29P2Q8IUI4 249 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 ODF3L1Q8IXM7 274 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 LYG1Q8N1E2 194 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 BEST4Q8NFU0 473 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 IFI27L2Q9H2X8 130 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 ABCB10Q9NRK6 738 aa16.48■□□□□ 0.23
HMGA2-211ENST00000545998 A0A1W2PPI3 338 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 MEIS3P1A6NDR6 274 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 ST8SIA5O15466 376 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 ARHGDIBP52566 201 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 CNIH2Q6PI25 160 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 EDARADDQ8WWZ3 215 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 SNAPC3Q92966 411 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 AGMATQ9BSE5 352 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 C11orf54Q9H0W9 315 aaPredicted RBP16.47■□□□□ 0.23
HMGA2-211ENST00000545998 RDH8Q9NYR8 311 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 ANAPC10Q9UM13 185 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 TPPPO94811 219 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 GAPDHP04406 335 aaKnown RBP16.47■□□□□ 0.23
HMGA2-211ENST00000545998 REG1BP48304 166 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 OR8H3Q8N146 312 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 GPX8Q8TED1 209 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 RTN4IP1Q8WWV3 396 aaPredicted RBP16.47■□□□□ 0.23
HMGA2-211ENST00000545998 TMEM158Q8WZ71 300 aa16.47■□□□□ 0.23
HMGA2-211ENST00000545998 GPR137BO60478 399 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 LPLP06858 475 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 CTXN2P0C2S0 81 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 BRS3P32247 399 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 LY6EQ16553 131 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.46■□□□□ 0.23
HMGA2-211ENST00000545998 CFHR4Q92496 578 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 ABHD1Q96SE0 405 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 GINS4Q9BRT9 223 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 SCPEP1Q9HB40 452 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 IFT46Q9NQC8 304 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 TCF19Q9Y242 345 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 A3GALT2U3KPV4 340 aa16.46■□□□□ 0.23
HMGA2-211ENST00000545998 TENM1Q9UKZ4 2725 aa16.45■□□□□ 0.22
HMGA2-211ENST00000545998 IGHV1-3A0A0C4DH29 117 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms