RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 CST11Q9H112 138 aa12.82□□□□□ -0.36
CPSF7-225ENST00000545934 TAF9BQ9HBM6 251 aa12.82□□□□□ -0.36
CPSF7-225ENST00000545934 OR2S2Q9NQN1 319 aa12.82□□□□□ -0.36
CPSF7-225ENST00000545934 ORC6Q9Y5N6 252 aa12.82□□□□□ -0.36
CPSF7-225ENST00000545934 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
CPSF7-225ENST00000545934 A0A1W2PN81 502 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 EGR2P11161 476 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-225ENST00000545934 CHRNA7P36544 502 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 SRSF7Q16629 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
CPSF7-225ENST00000545934 ZNF660Q6AZW8 331 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-225ENST00000545934 ADAMTSL5Q6ZMM2 481 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 C5orf24Q7Z6I8 188 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 ZNF554Q86TJ5 538 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 TCTEX1D1Q8N7M0 179 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 Q96MT0 163 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 JPT1Q9UK76 154 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 FOXA2Q9Y261 457 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-225ENST00000545934 NUBP2Q9Y5Y2 271 aa12.81□□□□□ -0.36
CPSF7-225ENST00000545934 TRBV5-5A0A0J9YX44 114 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 IGLV1-51P01701 117 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 GLAP06280 429 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 HTD2P86397 168 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 PITPNAQ00169 270 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 RIPK1Q13546 671 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 ECSCRQ19T08 205 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 CD200R1LQ6Q8B3 271 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 OR52L2PQ8NGH6 319 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 CASTOR1Q8WTX7 329 aa12.8□□□□□ -0.36
CPSF7-225ENST00000545934 FGF20Q9NP95 211 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-225ENST00000545934 NKX1-2Q9UD57 310 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-225ENST00000545934 SAA2-SAA4A0A096LPE2 208 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 OGG1O15527 345 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 HSPA12AO43301 675 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 YPEL1O60688 119 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 HSPB1P04792 205 aaKnown RBP12.79□□□□□ -0.36
CPSF7-225ENST00000545934 SAA2P0DJI9 122 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-225ENST00000545934 PPP1CCP36873 323 aaKnown RBP12.79□□□□□ -0.36
CPSF7-225ENST00000545934 OR3A3P47888 321 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 LRRC36Q1X8D7 754 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 SIGIRRQ6IA17 410 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 OR13C5Q8NGS8 318 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 MRPL30Q8TCC3 161 aaKnown RBP12.79□□□□□ -0.36
CPSF7-225ENST00000545934 APH1BQ8WW43 257 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 FLYWCH2Q96CP2 140 aaKnown RBP12.79□□□□□ -0.36
CPSF7-225ENST00000545934 SMIM19Q96E16 107 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 RHOVQ96L33 236 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 RDH12Q96NR8 316 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 YPEL2Q96QA6 119 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 OR4C12Q96R67 309 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 ERGIC3Q9Y282 383 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 PEX16Q9Y5Y5 336 aa12.79□□□□□ -0.36
CPSF7-225ENST00000545934 TRAV8-7A0A075B6U6 113 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 ARPC1BO15143 372 aaKnown RBP12.78□□□□□ -0.36
CPSF7-225ENST00000545934 RPS11P62280 158 aaKnown RBP eCLIP12.78□□□□□ -0.36
CPSF7-225ENST00000545934 CX3CL1P78423 397 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 C6orf141Q5SZD1 244 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 PYHIN1Q6K0P9 492 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 FAM71F2Q6NXP2 309 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 GLIPR1L1Q6UWM5 242 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 HAPLN4Q86UW8 402 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 PYDC1Q8WXC3 89 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 MUL1Q969V5 352 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 IFI27L2Q9H2X8 130 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 KIAA1456Q9P272 454 aa12.78□□□□□ -0.36
CPSF7-225ENST00000545934 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
CPSF7-225ENST00000545934 TNCP24821 2201 aa12.77□□□□□ -0.36
CPSF7-225ENST00000545934 H3BNX3 289 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 FCN1O00602 326 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 RRHO14718 337 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 LALBAP00709 142 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 FSTP19883 344 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 ETV1P50549 477 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 AKIRIN2Q53H80 203 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 OR2G6Q5TZ20 316 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 SGPP2Q8IWX5 399 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 CBR4Q8N4T8 237 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 Q96M66 194 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 SPATA25Q9BR10 227 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 FBXL15Q9H469 300 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 STUB1Q9UNE7 303 aa12.77□□□□□ -0.37
CPSF7-225ENST00000545934 UBE2QL1A1L167 161 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 IGHV3-11P01762 117 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 MAS1P04201 325 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 MGMTP16455 207 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 FUT3P21217 361 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 RASSF2P50749 326 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 Q499Y3 187 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 FAM131AQ6UXB0 335 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 CDH26Q8IXH8 852 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 OR14A2Q96R54 314 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 THAP7Q9BT49 309 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-225ENST00000545934 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 BANF2Q9H503 90 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 KCNIP1Q9NZI2 227 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 GAB2Q9UQC2 676 aa12.76□□□□□ -0.37
CPSF7-225ENST00000545934 TRBV5-7A0A0A0MS05 114 aa12.75□□□□□ -0.37
CPSF7-225ENST00000545934 WBP4O75554 376 aaKnown RBP12.75□□□□□ -0.37
CPSF7-225ENST00000545934 RGS11O94810 467 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms