RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 H3BUA1 57 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 ZNF780AO75290 641 aaPredicted RBP11.16□□□□□ -0.62
RTN3-214ENST00000545432 FADS2O95864 444 aaKnown RBP11.16□□□□□ -0.62
RTN3-214ENST00000545432 CSTBP04080 98 aaKnown RBP11.16□□□□□ -0.62
RTN3-214ENST00000545432 RCC1P18754 421 aaPredicted RBP11.16□□□□□ -0.62
RTN3-214ENST00000545432 MRPL28Q13084 256 aaKnown RBP11.16□□□□□ -0.62
RTN3-214ENST00000545432 FLOT2Q14254 428 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 ATP6AP1Q15904 470 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 LCN12Q6JVE5 192 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 PPP1R27Q86WC6 154 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 STX19Q8N4C7 294 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 OR5AK2Q8NH90 309 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 RNF5Q99942 180 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 FAM110AQ9BQ89 295 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 FBXL15Q9H469 300 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 SPACA1Q9HBV2 294 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 PAK1IP1Q9NWT1 392 aaPredicted RBP11.16□□□□□ -0.62
RTN3-214ENST00000545432 JPT1Q9UK76 154 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
RTN3-214ENST00000545432 IZUMO1RA6ND01 250 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 E9PI62 339 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 SLC25A17O43808 307 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 TFAP2AP05549 437 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 GLAP06280 429 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 GYS2P54840 703 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 TPPP2P59282 170 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 ATAD3CQ5T2N8 411 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 ZDHHC13Q8IUH4 622 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 LAX1Q8IWV1 398 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 LFNGQ8NES3 379 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 OR4K15Q8NH41 348 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 MS4A10Q96PG2 267 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 PDCD1LG2Q9BQ51 273 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 TAF9BQ9HBM6 251 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 OR2S2Q9NQN1 319 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 ING4Q9UNL4 249 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 GAB2Q9UQC2 676 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 POMPQ9Y244 141 aa11.15□□□□□ -0.62
RTN3-214ENST00000545432 A0A1W2PP11 408 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 MCRIP1C9JLW8 97 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 LY6G6CO95867 125 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 GTF2F2P13984 249 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 SNRPGP62308 76 aaKnown RBP11.14□□□□□ -0.63
RTN3-214ENST00000545432 GNMTQ14749 295 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 UNQ5815/PRO19632Q6UWF5 114 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 OR52L2PQ8NGH6 319 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 DDB2Q92466 427 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 RGP1Q92546 391 aaPredicted RBP11.14□□□□□ -0.63
RTN3-214ENST00000545432 MRPS24Q96EL2 167 aaKnown RBP11.14□□□□□ -0.63
RTN3-214ENST00000545432 ISG20L2Q9H9L3 353 aaKnown RBP11.14□□□□□ -0.63
RTN3-214ENST00000545432 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 ETAA1Q9NY74 926 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 TAS2R4Q9NYW5 299 aa11.14□□□□□ -0.63
RTN3-214ENST00000545432 SAA2-SAA4A0A096LPE2 208 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 RBBP9O75884 186 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 SAA2P0DJI9 122 aaPredicted RBP11.13□□□□□ -0.63
RTN3-214ENST00000545432 CT45A6P0DMU7 189 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 CT45A5P0DMU8 189 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 CT45A7P0DMV0 189 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 CD40LGP29965 261 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
RTN3-214ENST00000545432 OR3A3P47888 321 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 MEDAGQ5VYS4 303 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 OR5AN1Q8NGI8 311 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 LGALS12Q96DT0 336 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 MRPL48Q96GC5 212 aaKnown RBP11.13□□□□□ -0.63
RTN3-214ENST00000545432 RDH12Q96NR8 316 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 MYCBPQ99417 103 aaPredicted RBP11.13□□□□□ -0.63
RTN3-214ENST00000545432 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
RTN3-214ENST00000545432 FAM192AQ9GZU8 254 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
RTN3-214ENST00000545432 A0A0G2JLM5 398 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 OR5H14A6NHG9 310 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 FAM90A7PA6NKC0 464 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 FAM90A23PA8MXZ1 464 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 H0YJW9 148 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 GPX5O75715 221 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 TRGV3P03979 118 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 SERPINA2P20848 420 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 MC5RP33032 325 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 PPP1CCP36873 323 aaKnown RBP11.12□□□□□ -0.63
RTN3-214ENST00000545432 ALDH3A2P51648 485 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 GPR176Q14439 515 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 ZNF343Q6P1L6 599 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 LHFPL3Q86UP9 236 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 POC5Q8NA72 575 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 NEK7Q8TDX7 302 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 ST6GALNAC5Q9BVH7 336 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 ALG8Q9BVK2 526 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 A3GALT2U3KPV4 340 aa11.12□□□□□ -0.63
RTN3-214ENST00000545432 SNRPBP14678 240 aaKnown RBP11.11□□□□□ -0.63
RTN3-214ENST00000545432 IGFBP3P17936 291 aaPredicted RBP11.11□□□□□ -0.63
RTN3-214ENST00000545432 RAB12Q6IQ22 244 aa11.11□□□□□ -0.63
RTN3-214ENST00000545432 FAM131AQ6UXB0 335 aa11.11□□□□□ -0.63
RTN3-214ENST00000545432 C5orf24Q7Z6I8 188 aa11.11□□□□□ -0.63
RTN3-214ENST00000545432 PRR18Q8N4B5 295 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms