RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 HEATR5BQ9P2D3 2071 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 MYO7AQ13402 2215 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 TRAV17A0A0B4J275 112 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 LOC102723971A0A1B0GUV8 181 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 A0A1W2PPE2 198 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 F12P00748 615 aaPredicted RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 CTSSP25774 331 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 RAB7AP51149 207 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 SOX8P57073 446 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 QRFPP83859 136 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 TRIP6Q15654 476 aaKnown RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 ZNF343Q6P1L6 599 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 BHLHA15Q7RTS1 189 aaPredicted RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 TMEM251Q8N6I4 163 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 OR2Z1Q8NG97 314 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 OR4B1Q8NGF8 309 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 ZNF488Q96MN9 340 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 TRAV34A0A0B4J273 112 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 YIF1AO95070 293 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 HEXAP06865 529 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SCTP09683 121 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RFPL3SP0C7P2 107 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 CSN1S1P47710 185 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SPCS3P61009 180 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SPEM2Q0P670 501 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RTL8BQ17RB0 113 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 HLA-DRB5Q30154 266 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 KHDC3LQ587J8 217 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 FAM78BQ5VT40 261 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 VWA1Q6PCB0 445 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 EIF4E3Q8N5X7 224 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 TMEM230Q96A57 120 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 S1PR3Q99500 378 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 HES7Q9BYE0 225 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 DYNLRB1Q9NP97 96 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 IGKV1-9A0A0C4DH69 117 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SYNGR2O43760 224 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 HLA-GP17693 338 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 OR3A1P47881 315 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RSPO4Q2I0M5 234 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 NRN1LQ496H8 165 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 FFAR4Q5NUL3 377 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RNASEKQ6P5S7 137 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 LDLRAD3Q86YD5 345 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 FAM89BQ8N5H3 189 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 LRRC29Q8WV35 223 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RBM14Q96PK6 669 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 TPPP3Q9BW30 176 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RNF122Q9H9V4 155 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 FOXJ2Q9P0K8 574 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RCC2Q9P258 522 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZNF319Q9P2F9 582 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 LIPGQ9Y5X9 500 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 R4GN57 208 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 MDC1Q14676 2089 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 DBX1A6NMT0 343 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZNF729A6NN14 1252 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 ADH4P08319 380 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZNF708P17019 499 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZNF468Q5VIY5 522 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 DHRS11Q6UWP2 260 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 C11orf42Q8N5U0 333 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SLC25A40Q8TBP6 338 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 MRGPRDQ8TDS7 321 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SMIM12Q96EX1 92 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZNF703Q9H7S9 590 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 GSN-AS1Q9NRJ2 163 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 NAGKQ9UJ70 344 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ATP23Q9Y6H3 246 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 DEFB108AA8MXU0 73 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 F8VVB4 439 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 F8VWA3 439 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 AGFG2O95081 481 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 CRYAAP02489 173 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ATP6V0CP27449 155 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ERVS71-1P61550 626 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ARL16Q0P5N6 197 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 HIST3H3Q16695 136 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 INO80CQ6PI98 192 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 MRGPRGQ86SM5 289 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 CPEB3Q8NE35 698 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 NABP1Q96AH0 204 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 TBX15Q96SF7 602 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 TMEM147Q9BVK8 224 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 C1QTNF5Q9BXJ0 243 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 PARD6GQ9BYG4 376 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 PKIBQ9C010 78 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 PPP1R14DQ9NXH3 145 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SH3BGRL2Q9UJC5 107 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 PSG11Q9UQ72 335 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 COLQQ9Y215 455 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 PDE4DIPQ5VU43 2346 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 A0A1B0GV90 55 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 CDIPTO14735 213 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZNHIT1O43257 154 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SYNGR1O43759 233 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 GDF9O60383 454 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 DAOP14920 347 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 BMP5P22003 454 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms