RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PLA1AQ53H76 456 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 KLF17Q5JT82 389 aaPredicted RBP5.41□□□□□ -1.54
CDCA3-209ENST00000544610 NKAPLQ5M9Q1 402 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 CD276Q5ZPR3 534 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 PLET1Q6UQ28 207 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 Q6ZS46 218 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 C1orf122Q6ZSJ8 110 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 BTN2A1Q7KYR7 527 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 IZUMO1Q8IYV9 350 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 CD177Q8N6Q3 437 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 C8orf31Q8N9H6 132 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 OR5H2Q8NGV7 314 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 OR4K15Q8NH41 348 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 OR56B4Q8NH76 319 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 TERB2Q8NHR7 220 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 ENKURQ8TC29 256 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 MRPL30Q8TCC3 161 aaKnown RBP5.41□□□□□ -1.54
CDCA3-209ENST00000544610 ZFAND1Q8TCF1 268 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 NEK7Q8TDX7 302 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 NUDCD2Q8WVJ2 157 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 SNAPC3Q92966 411 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 ZNF486Q96H40 463 aaPredicted RBP5.41□□□□□ -1.54
CDCA3-209ENST00000544610 ZNF488Q96MN9 340 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 GAFA1Q96PS6 74 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 C11orf54Q9H0W9 315 aaPredicted RBP5.41□□□□□ -1.54
CDCA3-209ENST00000544610 UNKLQ9H9P5 680 aaKnown RBP5.41□□□□□ -1.54
CDCA3-209ENST00000544610 HRASLSQ9HDD0 168 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 KCNIP1Q9NZI2 227 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 NUP50Q9UKX7 468 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 UBE2J1Q9Y385 318 aaPredicted RBP5.41□□□□□ -1.54
CDCA3-209ENST00000544610 MAB21L2Q9Y586 359 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 NUBP2Q9Y5Y2 271 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 LINC00312Q9Y6C7 94 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 MGAM2Q2M2H8 2515 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 DSCAML1Q8TD84 2053 aa5.41□□□□□ -1.54
CDCA3-209ENST00000544610 TRBV6-7A0A0A0MS04 114 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ODAMA1E959 279 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ZNF729A6NN14 1252 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 A8MXK9 166 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 F5H0A9 414 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 CLDN34H7C241 214 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 F2RL2O00254 374 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 FABP7O15540 132 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 SPINT2O43291 252 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 NDUFB3O43676 98 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 TUSC2O75896 110 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 CYB5R3P00387 301 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 LIPFP07098 398 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 OR5H8P0DN80 308 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ZBTB25P24278 435 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 DUSP1P28562 367 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 BTCP35070 178 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 HRH1P35367 487 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ARPC4P59998 168 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 HLA-DRB3P79483 266 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 DEFA6Q01524 100 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 SPRNQ5BIV9 151 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 CT83Q5H943 113 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 KRBOX4Q5JUW0 171 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ZNF660Q6AZW8 331 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 C11orf88Q6PI97 169 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 Q6ZNX1 250 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 GDPD3Q7L5L3 318 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 LHFPL1Q86WI0 220 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ASCC1Q8N9N2 400 aaKnown RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 OR4S1Q8NGB4 309 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 OR4C16Q8NGL9 310 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 OR6F1Q8NGZ6 308 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 CCDC107Q8WV48 283 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 GALMQ96C23 342 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 NEIL1Q96FI4 390 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 COQ2Q96H96 371 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ZNF48Q96MX3 618 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 DUX5Q96PT3 197 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 TMEM246Q9BRR3 403 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ST6GALNAC5Q9BVH7 336 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 PPA2Q9H2U2 334 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 GAL3ST2Q9H3Q3 398 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 PATZ1Q9HBE1 687 aaKnown RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 CHMP1AQ9HD42 196 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 MMP26Q9NRE1 261 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 FAM212BQ9NTI7 297 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 IL36RNQ9UBH0 155 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 SLC25A10Q9UBX3 287 aaPredicted RBP5.4□□□□□ -1.54
CDCA3-209ENST00000544610 ZNF69Q9UC07 566 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 OR14J1Q9UGF5 321 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 TRAPPC2LQ9UL33 140 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 GAB2Q9UQC2 676 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 INSIG2Q9Y5U4 225 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 AUP1Q9Y679 476 aa5.4□□□□□ -1.54
CDCA3-209ENST00000544610 MEIKINA0A087WXM9 373 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 TRGV10A0A0A0MS01 117 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 KBTBD11-OT1A0A1B0GTJ5 212 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 hCG_1809904A0A1W2PP81 198 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 A0A1W2PPE2 198 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 A0A1W2PR64 198 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 A0A1W2PRV1 198 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 UBE2QL1A1L167 161 aa5.39□□□□□ -1.55
CDCA3-209ENST00000544610 SIRPB1O00241 398 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms