RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 IL13RA2Q14627 380 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 IRF3Q14653 427 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC25A47Q6Q0C1 308 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 BIVMQ86UB2 503 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 MARC2Q969Z3 335 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 TMEM45BQ96B21 275 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 RPUSD4Q96CM3 377 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ADAT3Q96EY9 351 aaPredicted RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 WDR89Q96FK6 387 aaPredicted RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 MARS2Q96GW9 593 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC25A22Q9H936 323 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 LSM2Q9Y333 95 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 CHCHD2Q9Y6H1 151 aaPredicted RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 MUC6Q6W4X9 2439 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF236Q9UL36 1845 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 KRBOX1C9JBD0 128 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 K7N7A8 449 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 C1QBP02746 253 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5AC1P0C628 307 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 GZMMP51124 257 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 MVDP53602 400 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 LCN2P80188 198 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 MGAT2Q10469 447 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 EXOSC2Q13868 293 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 GAMTQ14353 236 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SPINK9Q5DT21 86 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 RBPMSQ93062 196 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 TVP23CQ96ET8 276 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SFRP2Q96HF1 295 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 IMMP1LQ96LU5 166 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SFT2D2O95562 160 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 METTL15P1P0C7V9 234 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 CD200P41217 278 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 REG1BP48304 166 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 LYZP61626 148 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 HERV-K104P63124 156 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 FAM27E3Q08E93 113 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 BTN1A1Q13410 526 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 XAF1Q6GPH4 301 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 RNF144BQ7Z419 303 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 BAGE3Q86Y29 109 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 BAGE2Q86Y30 109 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 POC1AQ8NBT0 407 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF680Q8NEM1 530 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 GPX7Q96SL4 187 aaPredicted RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 KCNK15Q9H427 330 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 MIOXQ9UGB7 285 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 HILPDAQ9Y5L2 63 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SCN5AQ14524 2016 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 IGKV3D-11A0A0A0MRZ8 115 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 MS4A18H0YCH9 400 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 ATP5LO75964 103 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 PPYP01298 95 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 FAM106CPP0CH98 169 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 MS4A18Q3C1V0 323 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 C8orf82Q6P1X6 216 aaPredicted RBP5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 UNQ6494/PRO21346Q6UXR6 183 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 TPRX1Q8N7U7 411 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 OR4A4PQ8NGN8 299 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 KLF14Q8TD94 323 aaPredicted RBP5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 RNF2Q99496 336 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 SIRPDQ9H106 197 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 PRNDQ9UKY0 176 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 SYNGR1O43759 233 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 GAPDHP04406 335 aaKnown RBP5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 COX5BP10606 129 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 DAOP14920 347 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 MPV17P39210 176 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 SULT1A2P50226 295 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 RPS4XP62701 263 aaKnown RBP5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 PAFAH1B2P68402 229 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 DHRS2Q13268 280 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 PPP1R1AQ13522 171 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 RPL7L1Q6DKI1 246 aaKnown RBP5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 GPR137Q96N19 417 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 SIGMAR1Q99720 223 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 RAB18Q9NP72 206 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 SCN2AQ99250 2005 aa5.96□□□□□ -1.45
SRGAP1-206ENST00000543397 CCDC88CQ9P219 2028 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 IGHV1-69-2A0A0G2JMI3 117 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 DCTN6O00399 190 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 FOXH1O75593 365 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 CD37P11049 281 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 ORM2P19652 201 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 APOBEC3AP31941 199 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 RBM11P57052 281 aaKnown RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 SURF2Q15527 256 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 ST3GAL2Q16842 350 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF826PQ6ZT77 177 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 CADM3Q8N126 398 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM24BQ8N5W8 94 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 KCNE5Q9UJ90 142 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 KLK13Q9UKR3 277 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 PI4KAP42356 2102 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 TRAV8-7A0A075B6U6 113 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 RPL36A-HNRNPH2H7BZ11 118 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 RAB29O14966 203 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNHIT1O43257 154 aa5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 CTSDP07339 412 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-206ENST00000543397 VSIG8P0DPA2 414 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms