RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 PKIBQ9C010 78 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 A0A0U1RQV5 110 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 UBE2L6O14933 153 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 SLC35B1P78383 322 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 QTRT1Q9BXR0 403 aaKnown RBP16.99■□□□□ 0.31
HDAC4-215ENST00000543185 UBTD1Q9HAC8 227 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 SS18L1O75177 396 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-215ENST00000543185 OR8G5Q8NG78 346 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 HELZP42694 1942 aaKnown RBP16.99■□□□□ 0.31
HDAC4-215ENST00000543185 DYSFO75923 2080 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 HARBI1Q96MB7 349 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 TMEM222Q9H0R3 208 aa16.99■□□□□ 0.31
HDAC4-215ENST00000543185 CD74P04233 296 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 SRD5A2P31213 254 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 ZNF683Q8IZ20 524 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 FAM53AQ6NSI3 398 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-215ENST00000543185 OR10D3Q8NH80 312 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 MRPL18Q9H0U6 180 aaKnown RBP16.98■□□□□ 0.31
HDAC4-215ENST00000543185 NKX2-6A6NCS4 301 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 HMGCLL1Q8TB92 370 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 MS4A7Q9GZW8 240 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-215ENST00000543185 OR51B2Q9Y5P1 312 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 HPRT1P00492 218 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 AGAP20933 346 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 FSTP19883 344 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 LRRC75BQ2VPJ9 315 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 ANKRD37Q7Z713 158 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 C8orf44Q96CB5 159 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 TMEM189A5PLL7 270 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 VENTXO95231 258 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 CLEC5AQ9NY25 188 aa16.98■□□□□ 0.31
HDAC4-215ENST00000543185 EPHA8P29322 1005 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-215ENST00000543185 ATP5IP56385 69 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-215ENST00000543185 SPINK9Q5DT21 86 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 SOX21Q9Y651 276 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-215ENST00000543185 SOD3P08294 240 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 SCNM1Q9BWG6 230 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 C11orf68Q9H3H3 251 aaKnown RBP16.97■□□□□ 0.31
HDAC4-215ENST00000543185 TMEM30AQ9NV96 361 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 HYPMO75409 117 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 MRAP2Q96G30 205 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 LCN2P80188 198 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 CXorf67Q86X51 503 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-215ENST00000543185 H0Y8X5 98 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 ZNF324O75467 553 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-215ENST00000543185 ZXDAP98168 799 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 TAF1LQ8IZX4 1826 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 OR10S1Q8NGN2 331 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 ZDHHC8Q9ULC8 765 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 RAB1CQ92928 201 aa16.97■□□□□ 0.31
HDAC4-215ENST00000543185 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 F2RL2O00254 374 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 CDX4O14627 284 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-215ENST00000543185 FFAR1O14842 300 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 PSG9Q00887 426 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 TCTN1Q2MV58 587 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 TP53I13Q8NBR0 393 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-215ENST00000543185 C6orf106Q9H6K1 298 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-215ENST00000543185 CEACAM5P06731 702 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 TMEM78Q5T7P6 136 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 JKAMPQ9P055 326 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 HSPB7Q9UBY9 170 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 SOCS7O14512 581 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 KLRB1Q12918 225 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 NIT1Q86X76 327 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 OR4C45A6NMZ5 311 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 SLC17A3O00476 420 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 PPP2CBP62714 309 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 ZNF79Q15937 498 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 ZNF841Q6ZN19 808 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 TMPRSS2O15393 492 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 SLC23A3Q6PIS1 610 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 PRNTQ86SH4 94 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 RHOVQ96L33 236 aa16.96■□□□□ 0.31
HDAC4-215ENST00000543185 TRAV9-1A0A075B6T8 112 aa16.96■□□□□ 0.3
HDAC4-215ENST00000543185 CDC42EP2O14613 210 aa16.96■□□□□ 0.3
HDAC4-215ENST00000543185 DLK2Q6UY11 383 aa16.96■□□□□ 0.3
HDAC4-215ENST00000543185 UBALD2Q8IYN6 164 aa16.96■□□□□ 0.3
HDAC4-215ENST00000543185 LINC01465Q8N7H1 131 aa16.96■□□□□ 0.3
HDAC4-215ENST00000543185 PGLYRP3Q96LB9 341 aa16.96■□□□□ 0.3
HDAC4-215ENST00000543185 ADAD2Q8NCV1 583 aaKnown RBP16.96■□□□□ 0.3
HDAC4-215ENST00000543185 PLA2G10O15496 165 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 RPS11P62280 158 aaKnown RBP eCLIP16.95■□□□□ 0.3
HDAC4-215ENST00000543185 C10orf128Q5T292 105 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 FAM222BQ8WU58 562 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 METTL26Q96S19 204 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 WNT16Q9UBV4 365 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 A0A1B0GTL3 188 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 PPIHO43447 177 aaKnown RBP16.95■□□□□ 0.3
HDAC4-215ENST00000543185 RELQ04864 619 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-215ENST00000543185 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 ZNF793Q6ZN11 406 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 OR4D9Q8NGE8 314 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 OR8B2Q96RD0 313 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 LOC389332A0A1B0GUA5 103 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 K7N7A8 449 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 TCFL5Q9UL49 500 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 TM4SF4P48230 202 aa16.95■□□□□ 0.3
HDAC4-215ENST00000543185 MRPS18AQ9NVS2 196 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms