RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 TAS2R8Q9NYW2 309 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 MTFP1Q9UDX5 166 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 SLC23A1Q9UHI7 598 aa9.9□□□□□ -0.82
DDX55-210ENST00000543016 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 GSTZ1O43708 216 aaPredicted RBP9.89□□□□□ -0.83
DDX55-210ENST00000543016 CEACAM6P40199 344 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 ZNF137PP52743 207 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 ZNF45Q02386 682 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 FAM131AQ6UXB0 335 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 LURAP1LQ8IV03 231 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 TMEM86BQ8N661 226 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 ZNF439Q8NDP4 499 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 UBALD1Q8TB05 177 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 ABHD14AQ9BUJ0 271 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 NECAP2Q9NVZ3 263 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 PIPOXQ9P0Z9 390 aa9.89□□□□□ -0.83
DDX55-210ENST00000543016 IGHV3-43A0A0B4J1X8 118 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 IGKV1-6A0A0C4DH72 117 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 LY6LH3BQJ8 138 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 TXNL1O43396 289 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 SLC22A5O76082 557 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 IGHV3-43DP0DP04 118 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 PTHLHP12272 177 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 PPP1CCP36873 323 aaKnown RBP9.88□□□□□ -0.83
DDX55-210ENST00000543016 OR3A3P47888 321 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 DYNLT3P51808 116 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 DLX1P56177 255 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 HERPUD1Q15011 391 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 CDK10Q15131 360 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 IGSF11Q5DX21 431 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 CT45A1Q5HYN5 189 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 RUSC1-AS1Q66K80 236 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 FAM71F2Q6NXP2 309 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 LDLRAD3Q86YD5 345 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 H1FOOQ8IZA3 346 aaPredicted RBP9.88□□□□□ -0.83
DDX55-210ENST00000543016 GVQW1Q8N7I0 195 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 OR10V1Q8NGI7 309 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 OR52I2Q8NH67 350 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 CT45A3Q8NHU0 189 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 MAFIPQ8WZ33 124 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 RPEQ96AT9 228 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 RDH8Q9NYR8 311 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 GAB2Q9UQC2 676 aa9.88□□□□□ -0.83
DDX55-210ENST00000543016 RBMX2Q9Y388 322 aaKnown RBP9.88□□□□□ -0.83
DDX55-210ENST00000543016 IGKV1D-8A0A087WSZ0 117 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 A0A0U1RQK1 487 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 A0A1W2PRD5 423 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 A0A1W2PRF3 423 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 A0A1W2PRM7 423 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 VGLL3A8MV65 326 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 ZNF736B4DX44 427 aaPredicted RBP9.87□□□□□ -0.83
DDX55-210ENST00000543016 CLDN34H7C241 214 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 RAB29O14966 203 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 BET1O15155 118 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 GAPDHP04406 335 aaKnown RBP9.87□□□□□ -0.83
DDX55-210ENST00000543016 BRS3P32247 399 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 GNG10P50151 68 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 TAS2R19P59542 299 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 PRB3Q04118 309 aaPredicted RBP9.87□□□□□ -0.83
DDX55-210ENST00000543016 GNMTQ14749 295 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 DEFB112Q30KQ8 113 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 PLA1AQ53H76 456 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 TPTE2P1Q5T6R2 138 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 Q6YL49 198 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 OVCH2Q7RTZ1 564 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 BCL6BQ8N143 479 aaPredicted RBP9.87□□□□□ -0.83
DDX55-210ENST00000543016 OR8H3Q8N146 312 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 GDPD1Q8N9F7 314 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 TMEM229BQ8NBD8 167 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.87□□□□□ -0.83
DDX55-210ENST00000543016 OR5H2Q8NGV7 314 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 OR5R1Q8NH85 324 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 SSMEM1Q8WWF3 244 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 GIMAP1Q8WWP7 306 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 DEDD2Q8WXF8 326 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 S100ZQ8WXG8 99 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 SNAPC3Q92966 411 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 LEAP2Q969E1 77 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 SLC6A7Q99884 636 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 C11orf54Q9H0W9 315 aaPredicted RBP9.87□□□□□ -0.83
DDX55-210ENST00000543016 DPAGT1Q9H3H5 408 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 OR1A1Q9P1Q5 309 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 OR2W1Q9Y3N9 320 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 POMT1Q9Y6A1 747 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 V9GYH0 126 aa9.87□□□□□ -0.83
DDX55-210ENST00000543016 FAM172BPA6NC97 362 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 MEIS3P1A6NDR6 274 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 BTBD17A6NE02 478 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 LANCL1O43813 399 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 TUSC2O75896 110 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 CSF1P09603 554 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 OR5H8P0DN80 308 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 ZNF134P52741 427 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 AP3S2P59780 193 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 ZNF816Q0VGE8 651 aaPredicted RBP9.86□□□□□ -0.83
DDX55-210ENST00000543016 DYRK1AQ13627 763 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 SSX2Q16385 188 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 PYDC2Q56P42 97 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 VAX1Q5SQQ9 334 aa9.86□□□□□ -0.83
DDX55-210ENST00000543016 DHRS11Q6UWP2 260 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms