RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ZBTB25P24278 435 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 MADCAM1Q13477 382 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 HERPUD1Q15011 391 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 ZFAND2BQ8WV99 257 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 SSX3Q99909 188 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 CABLES2Q9BTV7 478 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 OR1A1Q9P1Q5 309 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 MRPS7Q9Y2R9 242 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 HSPA12AO43301 675 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 RNASE1P07998 156 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 CEACAM6P40199 344 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 CBX5P45973 191 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 IGSF11Q5DX21 431 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 LAX1Q8IWV1 398 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 OR5R1Q8NH85 324 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 MCFD2Q8NI22 146 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 RPEQ96AT9 228 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 DCUN1D5Q9BTE7 237 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 ABHD14AQ9BUJ0 271 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 TNFRSF19Q9NS68 423 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 EXTL2Q9UBQ6 330 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 ADAM30Q9UKF2 790 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 ATRQ13535 2644 aa13.81□□□□□ -0.2
RABGGTA-203ENST00000543002 BTBD17A6NE02 478 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 H3BUX3 64 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 ITGB1BP1O14713 200 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 TPPPO94811 219 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 IL3RAP26951 378 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 PRSS3P35030 304 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 DYNLT3P51808 116 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 ZNF137PP52743 207 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 PLA1AQ53H76 456 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 CCDC144NLQ6NUI1 221 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 HOGA1Q86XE5 327 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 GVQW1Q8N7I0 195 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 OR2AK2Q8NG84 335 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 PIFOQ8TCI5 191 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 TOMM40LQ969M1 308 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 ST6GALNAC6Q969X2 333 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 CHIAQ9BZP6 476 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 C6orf62Q9GZU0 229 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 TOLLIPQ9H0E2 274 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 ABCB10Q9NRK6 738 aa13.8□□□□□ -0.2
RABGGTA-203ENST00000543002 TRBV6-7A0A0A0MS04 114 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 BET1O15155 118 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 CTXN2P0C2S0 81 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 RAB7AP51149 207 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 ARHGDIBP52566 201 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 ZNF816Q0VGE8 651 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 DIAPH2-AS1Q14236 149 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 KRTAP21-3Q3LHN1 58 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 FOXB2Q5VYV0 432 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 C16orf87Q6PH81 154 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 CNIH2Q6PI25 160 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 BEST4Q8NFU0 473 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 OR10J5Q8NHC4 309 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 FAM216AQ8WUB2 273 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 EDARADDQ8WWZ3 215 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 GCDHQ92947 438 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 PARP12Q9H0J9 701 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 ANXA10Q9UJ72 324 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 VPREB3Q9UKI3 123 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 A3GALT2U3KPV4 340 aa13.79□□□□□ -0.2
RABGGTA-203ENST00000543002 HSD17B6O14756 317 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 GAPDHP04406 335 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 RAB13P51153 203 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 SNX29P2Q8IUI4 249 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 OR8H3Q8N146 312 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 LYG1Q8N1E2 194 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 GPX8Q8TED1 209 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 C11orf54Q9H0W9 315 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 IFI27L2Q9H2X8 130 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 MMP27Q9H306 513 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 SCPEP1Q9HB40 452 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 IFT46Q9NQC8 304 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 RDH8Q9NYR8 311 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 ANAPC10Q9UM13 185 aa13.78□□□□□ -0.2
RABGGTA-203ENST00000543002 A0A1W2PPI3 338 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 MEIS3P1A6NDR6 274 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 ST8SIA5O15466 376 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 LPLP06858 475 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 BRS3P32247 399 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 KRTAP24-1Q3LI83 254 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 ODF3L1Q8IXM7 274 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 C15orf40Q8WUR7 153 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 DIRAS2Q96HU8 199 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 GINS4Q9BRT9 223 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 AGMATQ9BSE5 352 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 GHITMQ9H3K2 345 aa13.77□□□□□ -0.21
RABGGTA-203ENST00000543002 SULT1C2O00338 296 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 LANCL1O43813 399 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 GPR137BO60478 399 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 REG1BP48304 166 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 LY6EQ16553 131 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 H1FOOQ8IZA3 346 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 RTN4IP1Q8WWV3 396 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 TMEM158Q8WZ71 300 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
RABGGTA-203ENST00000543002 ABHD1Q96SE0 405 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms