RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PROCRQ9UNN8 238 aa7.06□□□□□ -1.28
PRKAB1-207ENST00000542698 hCG_38984A0A1B0GV85 526 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 IGHV3-13P01766 116 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 IGHV3-7P01780 117 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 CD5P06127 495 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM157CP0CG43 387 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 NTF3P20783 257 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 CD81P60033 236 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 DMWDQ09019 674 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 DHRS13Q6UX07 377 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 C17orf82Q86X59 251 aaPredicted RBP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 FGFRL1Q8N441 504 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 FADS6Q8N9I5 356 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 IL22RA2Q969J5 263 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 OR2J1Q9GZK6 312 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 FZR1Q9UM11 496 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 FUT9Q9Y231 359 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF318Q5VUA4 2279 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 GALR2O43603 387 aaPredicted RBP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 SUB1P53999 127 aaKnown RBP eCLIP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 ERHP84090 104 aaKnown RBP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 RTL8BQ17RB0 113 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 SAXO1Q8IYX7 474 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 KDF1Q8NAX2 398 aaPredicted RBP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 H1FXQ92522 213 aaKnown RBP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 TAF15Q92804 592 aaKnown RBP eCLIP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF524Q96C55 264 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 IGLV3-32A0A0A0MS00 114 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 TGIF2-C20orf24A0A0A6YYL0 155 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 GATCO43716 136 aaKnown RBP7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 TPPP2P59282 170 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 HIST1H3AP68431 136 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 PMS2CLQ68D20 193 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF343Q6P1L6 599 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 DYNLRB1Q9NP97 96 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 CLN8Q9UBY8 286 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 SH3BGRL2Q9UJC5 107 aa7.05□□□□□ -1.28
PRKAB1-207ENST00000542698 LRRC30A6NM36 301 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 GZMHP20718 246 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 UCP1P25874 307 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 MPLP40238 635 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 GLIPR1P48060 266 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 STARD6P59095 220 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 RPS23P62266 143 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 AESQ08117 197 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 CSRP2Q16527 193 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 ALKBH6Q3KRA9 238 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 RTN4RL2Q86UN3 420 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 MDP1Q86V88 176 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 CPEB3Q8NE35 698 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 SLC25A40Q8TBP6 338 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 LRRC29Q8WV35 223 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 R3HDM4Q96D70 268 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 P2RX4Q99571 388 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM103A1Q9BTL3 118 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF407Q9C0G0 2248 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 TRGV10A0A0A0MS01 117 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 COLCA2A8K830 154 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 MT-CO3P00414 261 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 HRASP01112 189 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 HOXA6P31267 233 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 PKIAP61925 76 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 RHOBP62745 196 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 DCAF10Q5QP82 559 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 TRAT1Q6PIZ9 186 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 TOMM20LQ6UXN7 152 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 ZADH2Q8N4Q0 377 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 POM121L2Q96KW2 1035 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 LRFN3Q9BTN0 628 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 GGACTQ9BVM4 153 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 CXXC4Q9H2H0 198 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 AURKAIP1Q9NWT8 199 aaPredicted RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 AKAP6Q13023 2319 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 B4E171 279 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 OR5G3P0C626 314 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 RFPL3SP0C7P2 107 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 PGA5P0DJD9 388 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 TSPAN7P41732 249 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 KRTDAPP60985 99 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 MRPL14Q6P1L8 145 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 LYG1Q8N1E2 194 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 OR10G8Q8NGN5 311 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 IMMP1LQ96LU5 166 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 GSN-AS1Q9NRJ2 163 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 WNK2Q9Y3S1 2297 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 FER1L5A0AVI2 2057 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 NKX6-3A6NJ46 265 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 M0R1B8 84 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 FCN1O00602 326 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 SPRY3O43610 288 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 SRSF10O75494 262 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 OR2H2O95918 312 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 SRP19P09132 144 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 RPL29P47914 159 aaKnown RBP7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 UBE2G1P62253 170 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF506Q5JVG8 444 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 C1orf210Q8IVY1 113 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 SCCPDHQ8NBX0 429 aa7.04□□□□□ -1.28
PRKAB1-207ENST00000542698 DMRTA2Q96SC8 542 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms