RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 AKR1C8PQ5T2L2 129 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 ABHD17BQ5VST6 288 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 ADAM5Q6NVV9 412 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 MOB1BQ7L9L4 216 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 NUFIP2Q7Z417 695 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC35E3Q7Z769 313 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 STX12Q86Y82 276 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM251Q8N6I4 163 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 OR10V1Q8NGI7 309 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 OR10J5Q8NHC4 309 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 NANPQ8TBE9 248 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 NEK7Q8TDX7 302 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 BCL2L2Q92843 193 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF488Q96MN9 340 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 PSMG3Q9BT73 122 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 GPR87Q9BY21 358 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 HES7Q9BYE0 225 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 STRADBQ9C0K7 418 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 PARD6AQ9NPB6 346 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 SIRT7Q9NRC8 400 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 MBNL3Q9NUK0 354 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 ERRFI1Q9UJM3 462 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 LIPGQ9Y5X9 500 aa4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 PUS1Q9Y606 427 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATPAF1-212ENST00000542495 GPR179Q6PRD1 2367 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 A0A1W2PNU3 283 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 ARGFXA6NJG6 315 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 FAM166BA8MTA8 275 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 B4DEV8 164 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 C21orf140B9A014 251 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 H0YL77 283 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 FAM229AH3BQW9 127 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 WRBO00258 174 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 HS3ST1O14792 307 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 TNFSF12O43508 249 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 CLN5O75503 358 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 RHBDL1O75783 438 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 IGKV1-5P01602 117 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 S100A9P06702 114 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 SERPINE2P07093 398 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 PSG2P11465 335 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 CBR1P16152 277 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 HOXA5P20719 270 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 APLNRP35414 380 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 EIF2S3P41091 472 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 CD200P41217 278 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 GLIPR1P48060 266 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 RAB2AP61019 212 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 UBE2KP61086 200 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 ELOBQ15370 118 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF585BQ52M93 769 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 FAM90A2PQ658T7 463 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF497Q6ZNH5 498 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC16A13Q7RTY0 426 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 WDR86Q86TI4 376 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 HAPLN4Q86UW8 402 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF429Q86V71 674 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 C17orf78Q8N4C9 275 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF525Q8N782 197 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 TMEM217Q8N7C4 229 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 CYB561D1Q8N8Q1 229 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 MDS2Q8NDY4 140 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 OR1K1Q8NGR3 316 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 TCTEX1D2Q8WW35 142 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 RDH5Q92781 318 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 TVP23CQ96ET8 276 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 CDIP1Q9H305 208 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 MS4A5Q9H3V2 200 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 GSN-AS1Q9NRJ2 163 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 RPRMQ9NS64 109 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 CISD1Q9NZ45 108 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 FOXJ2Q9P0K8 574 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 OR1A1Q9P1Q5 309 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 ABI3Q9P2A4 366 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 PRSS50Q9UI38 385 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 FBXL7Q9UJT9 491 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 WIPI2Q9Y4P8 454 aa4.39□□□□□ -1.71
ATPAF1-212ENST00000542495 FREM1Q5H8C1 2179 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 A0A1W2PR80 420 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 C1QTNF9BB2RNN3 333 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 FAM90A26D6RGX4 464 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 SLC33A1O00400 549 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 SYNGR2O43760 224 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 CNOT4O95628 575 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 MT-CO3P00414 261 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 IFNA5P01569 189 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 FABP1P07148 127 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 CXCL1P09341 107 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 FBP1P09467 338 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 NQO2P16083 231 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 CA6P23280 308 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 TAGLN2P37802 199 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 RND2P52198 227 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 OR2B8PP59922 312 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 DLK1P80370 383 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 SERF2P84101 59 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 ARL16Q0P5N6 197 aa4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 EIF4EBP1Q13541 118 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-212ENST00000542495 ZNF146Q15072 292 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms