RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SFT2D2O95562 160 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 OR5G3P0C626 314 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 OR5AC1P0C628 307 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 ZNF17P17021 662 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 DUSP1P28562 367 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 BIDP55957 195 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 PAX2Q02962 417 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 HIST3H3Q16695 136 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 IQCJQ1A5X6 159 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 TMEM176BQ3YBM2 270 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 MTURNQ8N3F0 131 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 RNF133Q8WVZ7 376 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 ABHD6Q9BV23 337 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 EMC6Q9BV81 110 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 SCRT1Q9BWW7 348 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 MAGT1Q9H0U3 335 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 DEPPQ9NTK1 212 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 ABI3Q9P2A4 366 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 HSF4Q9ULV5 492 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 COX11Q9Y6N1 276 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 NCKAP5O14513 1909 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 DANCRP0C864 163 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 ZNF708P17019 499 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 SFTPDP35247 375 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 MFGE8Q08431 387 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 SNAI3Q3KNW1 292 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 SLC18B1Q6NT16 456 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 ZNF429Q86V71 674 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 GBGT1Q8N5D6 347 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 POC1AQ8NBT0 407 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 NOXO1Q8NFA2 376 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 TMEM230Q96A57 120 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 MIEN1Q9BRT3 115 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 ELOVL5Q9NYP7 299 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 OR6C3Q9NZP0 311 aa6.87□□□□□ -1.31
PDLIM5-221ENST00000542407 ZNF318Q5VUA4 2279 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 BORCS7-ASMTA0A0B4J1R7 106 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 SDCBPO00560 298 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 PDE6DO43924 150 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 OR5H8P0DN80 308 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 FAHP16930 419 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 TNFRSF1AP19438 455 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 RANP62826 216 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 RPL32P62910 135 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 CCL20P78556 96 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 GNMTQ14749 295 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 UEVLDQ8IX04 471 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 SMIM20Q8N5G0 67 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 OR52N5Q8NH56 324 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 LYPD6BQ8NI32 183 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 OXGR1Q96P68 337 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 OBP2BQ9NPH6 170 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 IGHV2OR16-5A0A0B4J2B6 119 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 hCG_38984A0A1B0GV85 526 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 PINLYPA6NC86 204 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 WIPF3A6NGB9 483 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 RFPL3SP0C7P2 107 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 TRIP6Q15654 476 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 ZNF260Q3ZCT1 412 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 RAET1LQ5VY80 246 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 INO80CQ6PI98 192 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 PLXDC2Q6UX71 529 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 HOGA1Q86XE5 327 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 AQP3Q92482 292 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 CYYR1Q96J86 154 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 LRFN3Q9BTN0 628 aa6.86□□□□□ -1.31
PDLIM5-221ENST00000542407 FAM230AA0A1W2PPH8 454 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 XRCC2O43543 280 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 LMX1BO60663 402 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 LYL1P12980 280 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 AZU1P20160 251 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 SUPT4H1P63272 117 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 SPIN3Q5JUX0 258 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 FAM166AQ6J272 317 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 SLC25A47Q6Q0C1 308 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 OR1N2Q8NGR9 330 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 OR10X1Q8NGY0 326 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 GPR146Q96CH1 333 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 NIPSNAP3BQ9BS92 247 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 LIPGQ9Y5X9 500 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 A0A0J9YW62 118 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 RBFOX3A6NFN3 312 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 G3V4G9 280 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 SRD5A2P31213 254 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 BAXQ07812 192 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 TCF15Q12870 199 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 MFAP5Q13361 173 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 AADACL3Q5VUY0 350 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 ZNF880Q6PDB4 577 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 GGNQ86UU5 652 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 STPG4Q8N801 248 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 CYB561D1Q8N8Q1 229 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 ZFP62Q8NB50 900 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 OR10S1Q8NGN2 331 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 ST6GALNAC5Q9BVH7 336 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 SRXN1Q9BYN0 137 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 TMEM38BQ9NVV0 291 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 ZNF107Q9UII5 783 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 GPR132Q9UNW8 380 aa6.85□□□□□ -1.31
PDLIM5-221ENST00000542407 KIAA1549Q9HCM3 1950 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms