RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 BORCS7Q96B45 105 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 ZG16BQ96DA0 208 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 RCHY1Q96PM5 261 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 ATP5SQ99766 215 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 NDFIP1Q9BT67 221 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 GGTLC1Q9BX51 225 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 VN1R1Q9GZP7 353 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 CHST6Q9GZX3 395 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 ATG10Q9H0Y0 220 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 NXF5Q9H1B4 397 aaKnown RBP3.71□□□□□ -1.82
SNHG1-219ENST00000542112 IFI27L2Q9H2X8 130 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 NPVFQ9HCQ7 196 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 RPRMQ9NS64 109 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 C1orf123Q9NWV4 160 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 HCFC1R1Q9NWW0 138 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 ONECUT1Q9UBC0 465 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 LHX3Q9UBR4 397 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 KCNS2Q9ULS6 477 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 OARD1Q9Y530 152 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF780BQ9Y6R6 833 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 ALPK3Q96L96 1907 aa3.71□□□□□ -1.82
SNHG1-219ENST00000542112 MBLAC1A4D2B0 266 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 MBD3L4A6NDZ8 208 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 MBD3L3A6NE82 208 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ANTXRLA6NF34 631 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 OR2T8A6NH00 312 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PRSS29PA6NIE9 313 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 LIPT2A6NK58 231 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 SLC38A8A6NNN8 435 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 FABP5P3A8MUU1 101 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF878C9JN71 531 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 M0QXV9 152 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 P2RY10O00398 339 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 FFAR1O14842 300 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 RER1O15258 196 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 SYNGR1O43759 233 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 UPK3AO75631 287 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 CEACAM4O75871 244 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 STC2O76061 302 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ETHE1O95571 254 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ORM1P02763 201 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 KLKB1P03952 638 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 FGF1P05230 155 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 EDN1P05305 212 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 CELA2AP08217 269 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 CT45A10P0DMU9 189 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 HIST1H1EP10412 219 aaKnown RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 IRF1P10914 325 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 FABP2P12104 132 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 EGR1P18146 543 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PGCP20142 388 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PMCHP20382 165 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 EDNRAP25101 427 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 CRYBB3P26998 211 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PRDX3P30048 256 aaKnown RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 CCKBRP32239 447 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 OPRM1P35372 400 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 TNFSF9P41273 254 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 CCR2P41597 374 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 FRKP42685 505 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ASCL1P50553 236 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 EFNA5P52803 228 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PPP1CBP62140 327 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 NTHL1P78549 312 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 TIAL1Q01085 375 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 FMODQ06828 376 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 PSG7Q13046 419 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 EDDM3AQ14507 147 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 EFNB3Q15768 340 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ALKBH6Q3KRA9 238 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 Q499Y3 187 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 GLYATL3Q5SZD4 288 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 NOXRED1Q6NXP6 359 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ACSM6Q6P461 480 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 GLB1LQ6UWU2 654 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 DHRS13Q6UX07 377 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ASCL4Q6XD76 172 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 C16orf82Q7Z2V1 217 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 HOGA1Q86XE5 327 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF676Q8N7Q3 588 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 RNF152Q8N8N0 203 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 Q8N976 141 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ADAD2Q8NCV1 583 aaKnown RBP3.7□□□□□ -1.82
SNHG1-219ENST00000542112 MORN4Q8NDC4 146 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 OR5AR1Q8NGP9 310 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 OR1L3Q8NH93 324 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 SGMS2Q8NHU3 365 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 C16orf52Q8NHV5 167 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 ZNF563Q8TA94 476 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 FAM213BQ8TBF2 198 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 C18orf32Q8TCD1 76 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 HMGB4Q8WW32 186 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 MBD3L1Q8WWY6 194 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 OXGR1Q96P68 337 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 DERL3Q96Q80 235 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 TNFRSF13CQ96RJ3 184 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 TIMP4Q99727 224 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 TXNDC17Q9BRA2 123 aa3.7□□□□□ -1.82
SNHG1-219ENST00000542112 COMMD5Q9GZQ3 224 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms