RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RAB39BQ96DA2 213 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 PARP11Q9NR21 331 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 GAR1Q9NY12 217 aaKnown RBP13.81□□□□□ -0.2
VARS2-212ENST00000542001 IGKV1D-13A0A0B4J2D9 117 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 PGLYRP1O75594 196 aaPredicted RBP13.8□□□□□ -0.2
VARS2-212ENST00000542001 IGKV1-13P0DP09 117 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 NAAAQ02083 359 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 HES1Q14469 280 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 TMEM54Q969K7 222 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 OR10X1Q8NGY0 326 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 FAM210BQ96KR6 192 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 DMRTA2Q96SC8 542 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 TOLLIPQ9H0E2 274 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 IGKV1-27A0A075B6S5 117 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 hCG_38984A0A1B0GV85 526 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 NPIPB13A6NJU9 1138 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 NPIPB4C9JG80 1138 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 CCL8P80075 99 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 FAM201AQ5SY85 155 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 FADS6Q8N9I5 356 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 FAM103A1Q9BTL3 118 aaKnown RBP13.8□□□□□ -0.2
VARS2-212ENST00000542001 OR51I2Q9H344 312 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 SEC11BP0C7V7 166 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 ZNF90Q03938 601 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 WDR25Q64LD2 544 aaPredicted RBP13.8□□□□□ -0.2
VARS2-212ENST00000542001 ATP5SQ99766 215 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 GPR87Q9BY21 358 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 CACFD1Q9UGQ2 172 aa13.8□□□□□ -0.2
VARS2-212ENST00000542001 EDARADDQ8WWZ3 215 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 MIOXQ9UGB7 285 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 COL4A3Q01955 1670 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 IGSF23A1L1A6 192 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 B4E171 279 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 PRRG2O14669 202 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 PAGE4O60829 102 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 NTF3P20783 257 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 TSPAN7P41732 249 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 EIF3IQ13347 325 aaKnown RBP13.79□□□□□ -0.2
VARS2-212ENST00000542001 LURAP1Q96LR2 239 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 TRGV8A0A0C4DH27 118 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 TMPRSS2O15393 492 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 ANOS1P23352 680 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 CASP6P55212 293 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 IL24Q13007 206 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 DTD1Q8TEA8 209 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 COMMD5Q9GZQ3 224 aa13.79□□□□□ -0.2
VARS2-212ENST00000542001 DNASE2O00115 360 aaPredicted RBP13.78□□□□□ -0.2
VARS2-212ENST00000542001 DNPH1O43598 174 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 IGHV3-48P01763 117 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 SSTR5P35346 364 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 GLIPR1P48060 266 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 ACOT6Q3I5F7 207 aaPredicted RBP13.78□□□□□ -0.2
VARS2-212ENST00000542001 MSI2Q96DH6 328 aaKnown RBP13.78□□□□□ -0.2
VARS2-212ENST00000542001 RNF122Q9H9V4 155 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 NOTCH2Q04721 2471 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 CLDN34H7C241 214 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 ACACBO00763 2458 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 LDLRAD4O15165 306 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 CYTIPO60759 359 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 UCP2P55851 309 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 HOXA4Q00056 320 aaPredicted RBP13.78□□□□□ -0.2
VARS2-212ENST00000542001 HGFACQ04756 655 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 STUMQ69YW2 141 aa13.78□□□□□ -0.2
VARS2-212ENST00000542001 LOC390937A0A1W2PQ73 354 aa13.77□□□□□ -0.2
VARS2-212ENST00000542001 RND3P61587 244 aa13.77□□□□□ -0.2
VARS2-212ENST00000542001 FOXC1Q12948 553 aa13.77□□□□□ -0.2
VARS2-212ENST00000542001 BTNL8Q6UX41 500 aa13.77□□□□□ -0.2
VARS2-212ENST00000542001 SELENOHQ8IZQ5 122 aaKnown RBP13.77□□□□□ -0.2
VARS2-212ENST00000542001 HBZP02008 142 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 H3F3AP84243 136 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 RIPPLY2Q5TAB7 128 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 Q8IYB0 196 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 BMPERQ8N8U9 685 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 C22orf15Q8WYQ4 148 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 R3HDM4Q96D70 268 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 OR4C12Q96R67 309 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 G3V3Q6 166 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 TCL1AP56279 114 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 COL10A1Q03692 680 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 C21orf62-AS1Q17RA5 79 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
VARS2-212ENST00000542001 FGFRL1Q8N441 504 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 OR4A4PQ8NGN8 299 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 Q9N2K0 584 aa13.77□□□□□ -0.21
VARS2-212ENST00000542001 IGHV3-21A0A0B4J1V1 117 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 CSRP2Q16527 193 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 WFIKKN1Q96NZ8 548 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 TMEM241Q24JQ0 296 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 TRGV10A0A0A0MS01 117 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 C9orf172C9J069 976 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 CNIH1O95406 144 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 COMMD1Q8N668 190 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 FDCSPQ8NFU4 85 aa13.76□□□□□ -0.21
VARS2-212ENST00000542001 LILRA1O75019 489 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 REG4Q9BYZ8 158 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 C21orf140B9A014 251 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 TRGC2P03986 189 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 CDC34P49427 236 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms