RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 TOLLIPQ9H0E2 274 aa11.17□□□□□ -0.62
PRKAB1-206ENST00000541640 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
PRKAB1-206ENST00000541640 UNKLQ9H9P5 680 aaKnown RBP11.17□□□□□ -0.62
PRKAB1-206ENST00000541640 OR14J1Q9UGF5 321 aa11.17□□□□□ -0.62
PRKAB1-206ENST00000541640 IGHV3-64DA0A0J9YX35 117 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 HBE1P02100 147 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 FTH1P19P0C7X4 201 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 PTAFRP25105 342 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 CEBPDP49716 269 aaPredicted RBP11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 AKR1D1P51857 326 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 RAB5BP61020 215 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 SRSF6Q13247 344 aaKnown RBP11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 HABP2Q14520 560 aaPredicted RBP11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 ZNF645Q8N7E2 425 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 C9orf106Q8NAJ2 232 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 C20orf24Q9BUV8 137 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 ASCL3Q9NQ33 180 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 PSENENQ9NZ42 101 aa11.16□□□□□ -0.62
PRKAB1-206ENST00000541640 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 TRAV17A0A0B4J275 112 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 OOEPA6NGQ2 149 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 FAM90A26D6RGX4 464 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 WISP2O76076 250 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 SRP19P09132 144 aaKnown RBP11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 KITLGP21583 273 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 RAB2AP61019 212 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 ZNF506Q5JVG8 444 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 VWA1Q6PCB0 445 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 C2CD4CQ8TF44 421 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 SARAFQ96BY9 339 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 GALMQ96C23 342 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 RIF1Q5UIP0 2472 aaKnown RBP11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 AGFG2O95081 481 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 OR8U8P0C7N1 319 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 OR3A1P47881 315 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 ACP7Q6ZNF0 438 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 ZFP82Q8N141 532 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 OR1L1Q8NH94 360 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 SFT2D1Q8WV19 159 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 C12orf57Q99622 126 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 MMP24Q9Y5R2 645 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 ZNF292O60281 2723 aa11.15□□□□□ -0.62
PRKAB1-206ENST00000541640 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 C12orf77C9JDV5 145 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 WNT9BO14905 357 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 SCAF4O95104 1147 aaKnown RBP11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 HSPB1P04792 205 aaKnown RBP11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 IFNA4P05014 189 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 IAPPP10997 89 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 DAOP14920 347 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 EIF4EBP1Q13541 118 aaPredicted RBP11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 ICAM4Q14773 271 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 SLC25A24Q6NUK1 477 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF826PQ6ZT77 177 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 FGFRL1Q8N441 504 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF525Q8N782 197 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 CLDND2Q8NHS1 167 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 PARD6GQ9BYG4 376 aaPredicted RBP11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 PLSCR4Q9NRQ2 329 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 DLL1O00548 723 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 PPIHO43447 177 aaKnown RBP11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 CECR9P0C854 216 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 HBG1P69891 147 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 HBG2P69892 147 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 ARL16Q0P5N6 197 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 MSMO1Q15800 293 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 HAGHQ16775 308 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 WDR82Q6UXN9 313 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 HAPLN4Q86UW8 402 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 CXorf67Q86X51 503 aaPredicted RBP11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 SCGB1C1Q8TD33 95 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 ISOC2Q96AB3 205 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 COQ2Q96H96 371 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 BCL2L14Q9BZR8 327 aa11.14□□□□□ -0.63
PRKAB1-206ENST00000541640 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF891A8MT65 544 aaPredicted RBP11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 METTL15P1P0C7V9 234 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 WT1P19544 449 aaPredicted RBP11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 AGAP20933 346 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 IL2RGP31785 369 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 MAS1LP35410 378 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 Q6ZR03 302 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF561Q8N587 486 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 OR2D2Q9H210 308 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 RNF150Q9ULK6 438 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 PUS1Q9Y606 427 aaKnown RBP eCLIP11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 A6NLC8 198 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 IFNL4K9M1U5 179 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 TIMM8AO60220 97 aaPredicted RBP11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 HBZP02008 142 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 P0C879 139 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 AESQ08117 197 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 LRRC75BQ2VPJ9 315 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 ACSF3Q4G176 576 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms