RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ZNF610Q8N9Z0 462 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 FAM215AQ9Y5M1 114 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 URGCP-MRPS24S4R325 110 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 TGIF2-C20orf24A0A0A6YYL0 155 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 AGFG2O95081 481 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 HSPB1P04792 205 aaKnown RBP14.51□□□□□ -0.09
SPIDR-227ENST00000541342 HAAOP46952 286 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 UBE2KP61086 200 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 OR2T2Q6IF00 324 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 C20orf204Q6ZNR8 217 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 TOLLIPQ9H0E2 274 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 MTCH1Q9NZJ7 389 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 DOK5Q9P104 306 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 WSB1Q9Y6I7 421 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 ACACAQ13085 2346 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 GFRA3O60609 400 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 ERVS71-1P61550 626 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 VAMP2P63027 116 aa14.51□□□□□ -0.09
SPIDR-227ENST00000541342 SRSF7Q16629 238 aaKnown RBP eCLIP14.51□□□□□ -0.09
SPIDR-227ENST00000541342 KIAA1324LA8MWY0 1029 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-227ENST00000541342 MKRN2OSH3BPM6 223 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 BAXQ07812 192 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 IGFBP7Q16270 282 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 INO80CQ6PI98 192 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-227ENST00000541342 PCSK4Q6UW60 755 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 CXorf67Q86X51 503 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-227ENST00000541342 LINC00469Q8N7U9 141 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 OR5P3Q8WZ94 311 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A10PA6NDY2 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A18PA6NE21 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A16PA6NEW6 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A20PA6NIJ5 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A8PA6NJQ4 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A7PA6NKC0 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A22PA8MWA6 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A12PA8MX19 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A5PA8MXJ8 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A23PA8MXZ1 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 C3orf80F5H4A9 247 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 HSPA12AO43301 675 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A15PP0C7V4 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A13PP0C7W8 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A14PP0C7W9 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A24PP0C7X0 464 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 CDX1P47902 265 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-227ENST00000541342 FGF12P61328 243 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 SPNS3Q6ZMD2 512 aa14.5□□□□□ -0.09
SPIDR-227ENST00000541342 GNPNAT1Q96EK6 184 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-227ENST00000541342 CHD3Q12873 2000 aaKnown RBP14.5□□□□□ -0.09
SPIDR-227ENST00000541342 RD3LP0DJH9 198 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 ATP5SQ99766 215 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 UNKLQ9H9P5 680 aaKnown RBP14.49□□□□□ -0.09
SPIDR-227ENST00000541342 TP53TG5Q9Y2B4 290 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BKO60814 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BJP06899 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BOP23527 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BBP33778 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BDP58876 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BCP62807 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST2H2BEQ16778 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.49□□□□□ -0.09
SPIDR-227ENST00000541342 C1orf162Q8NEQ5 155 aaPredicted RBP14.49□□□□□ -0.09
SPIDR-227ENST00000541342 OR5A2Q8NGI9 324 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 OR5D13Q8NGL4 314 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BHQ93079 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BNQ99877 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 HIST1H2BMQ99879 126 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 OR2J1Q9GZK6 312 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 ZNF71Q9NQZ8 489 aaPredicted RBP14.49□□□□□ -0.09
SPIDR-227ENST00000541342 PROCRQ9UNN8 238 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 PIEZO2Q9H5I5 2752 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 DUXBA0A1W2PPF3 345 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 H3BP45 60 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 PGLYRP1O75594 196 aaPredicted RBP14.49□□□□□ -0.09
SPIDR-227ENST00000541342 IGKV3-15P01624 115 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 CRYABP02511 175 aaKnown RBP14.49□□□□□ -0.09
SPIDR-227ENST00000541342 PPP1CBP62140 327 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 IZUMO4Q1ZYL8 232 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 POM121Q96HA1 1249 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 CDH20Q9HBT6 801 aa14.49□□□□□ -0.09
SPIDR-227ENST00000541342 ANKRD30BLA7E2S9 258 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 H0Y980 276 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 MMP9P14780 707 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 TAS2R30P59541 319 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 ATP23Q9Y6H3 246 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 WDR1O75083 606 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 CA6P23280 308 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 NDUFA6P56556 154 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 AKR1C8PQ5T2L2 129 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 CMTM1Q8IZ96 169 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 TVP23CQ96ET8 276 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 SYNGR1O43759 233 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 GLIPR1P48060 266 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 GFI1BQ5VTD9 330 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 MPC1Q9Y5U8 109 aa14.48□□□□□ -0.09
SPIDR-227ENST00000541342 J3QW42 95 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 RPL23AP62750 156 aaKnown RBP14.47□□□□□ -0.09
SPIDR-227ENST00000541342 MRPL49Q13405 166 aaKnown RBP14.47□□□□□ -0.09
SPIDR-227ENST00000541342 ZNF674Q2M3X9 581 aa14.47□□□□□ -0.09
SPIDR-227ENST00000541342 FAM90A2PQ658T7 463 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms