RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ZNRD1Q9P1U0 126 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 GNG12Q9UBI6 72 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 ZNF107Q9UII5 783 aaPredicted RBP7.63□□□□□ -1.19
DDX55-208ENST00000541259 TBC1D24Q9ULP9 559 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 KPTNQ9Y664 436 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 SESN1Q9Y6P5 492 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 HIVEP1P15822 2718 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PRD5 423 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PRF3 423 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PRM7 423 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 HSPA12AO43301 675 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 RBP4P02753 201 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 AMY2AP04746 511 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 AADACP22760 399 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 PRTN3P24158 256 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 ZBTB25P24278 435 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 COX7A1P24310 79 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 FCGR2CP31995 323 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 GNG10P50151 68 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 MORN2Q502X0 79 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 RNASE10Q5GAN6 216 aaKnown RBP7.62□□□□□ -1.19
DDX55-208ENST00000541259 VAX1Q5SQQ9 334 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 METTL11BQ5VVY1 283 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 ZNF660Q6AZW8 331 aaPredicted RBP7.62□□□□□ -1.19
DDX55-208ENST00000541259 DHRS11Q6UWP2 260 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 C1orf122Q6ZSJ8 110 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 H1FOOQ8IZA3 346 aaPredicted RBP7.62□□□□□ -1.19
DDX55-208ENST00000541259 PNKDQ8N490 385 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 ZNF439Q8NDP4 499 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 OR10A7Q8NGE5 316 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 OR52M1Q8NGK5 317 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 TNFRSF14Q92956 283 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 SMR3AQ99954 134 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 GINS4Q9BRT9 223 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 ZNF2Q9BSG1 426 aaPredicted RBP7.62□□□□□ -1.19
DDX55-208ENST00000541259 C11orf54Q9H0W9 315 aaPredicted RBP7.62□□□□□ -1.19
DDX55-208ENST00000541259 TMEM133Q9H2Q1 129 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 C7orf69Q9H7B7 122 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 RDH8Q9NYR8 311 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 ZNF69Q9UC07 566 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 PSG11Q9UQ72 335 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 AUP1Q9Y679 476 aa7.62□□□□□ -1.19
DDX55-208ENST00000541259 SONP18583 2426 aaKnown RBP7.62□□□□□ -1.19
DDX55-208ENST00000541259 IGHV3OR16-10A0A075B7F0 116 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 IGKV1D-13A0A0B4J2D9 117 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 hCG_1809904A0A1W2PP81 198 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PPE2 198 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PR64 198 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PRV1 198 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 RNASEK-C17orf49H0YIS7 233 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 LYRM1O43325 122 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 YPEL1O60688 119 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 TUSC2O75896 110 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 IFNA6P05013 189 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 CTXN2P0C2S0 81 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 IGKV1-13P0DP09 117 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 TBPP20226 339 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 BTCP35070 178 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 CCR6P51684 374 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 FXYD4P59646 89 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 AP3S2P59780 193 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 TSPAN5P62079 268 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 MEF2DQ14814 521 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 ACTBL2Q562R1 376 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 CT45A1Q5HYN5 189 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 SHISA2Q6UWI4 295 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 SPNS3Q6ZMD2 512 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 ABHD12Q8N2K0 398 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 OR51S1Q8NGJ8 323 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 CT45A3Q8NHU0 189 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 GIMAP1Q8WWP7 306 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 LHX4Q969G2 390 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 MRGPRFQ96AM1 343 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 CREB3L1Q96BA8 519 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 C18orf12Q96KH6 178 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 YPEL2Q96QA6 119 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 TOLLIPQ9H0E2 274 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 METTL8Q9H825 291 aaKnown RBP7.61□□□□□ -1.19
DDX55-208ENST00000541259 UNKLQ9H9P5 680 aaKnown RBP7.61□□□□□ -1.19
DDX55-208ENST00000541259 RAB9BQ9NP90 201 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 MCUBQ9NWR8 336 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 JPT1Q9UK76 154 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 RNF150Q9ULK6 438 aa7.61□□□□□ -1.19
DDX55-208ENST00000541259 A0A087X0M5 115 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 IGHV2-26A0A0B4J1V2 119 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 CENPVL3A0A0U1RRI6 287 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 A0A1B0GX30 115 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 OR5H14A6NHG9 310 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 DISC1C4P0D8 188 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 J3QR06 171 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 DIRAS3O95661 229 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 GATA3P23771 443 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 CD34P28906 385 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 ASAH1Q13510 395 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 DCTN2Q13561 401 aaKnown RBP7.6□□□□□ -1.19
DDX55-208ENST00000541259 SCGB2B2Q4G0G5 96 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 AADACL3Q5VUY0 350 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 OR13C8Q8NGS7 320 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 OR13D1Q8NGV5 346 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 OR6F1Q8NGZ6 308 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms