RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TMEM52Q8NDY8 209 aa13□□□□□ -0.33
SMARCA4-207ENST00000541122 M0QZ24 198 aa13□□□□□ -0.33
SMARCA4-207ENST00000541122 RPL30P62888 115 aaKnown RBP13□□□□□ -0.33
SMARCA4-207ENST00000541122 ATRAIDQ6UW56 229 aa13□□□□□ -0.33
SMARCA4-207ENST00000541122 C16orf47Q6ZP98 133 aaPredicted RBP13□□□□□ -0.33
SMARCA4-207ENST00000541122 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
SMARCA4-207ENST00000541122 CXorf66Q5JRM2 361 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 SSX8Q7RTT4 187 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 PAXXQ9BUH6 204 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 DTX4Q9Y2E6 619 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 RAB29O14966 203 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 KLF4O43474 513 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 KLF7O75840 302 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 LEPROTL1O95214 131 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 CCL2P13500 99 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 ID4P47928 161 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 KLF3P57682 345 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 OR1L8Q8NGR8 309 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 LSM10Q969L4 123 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 KCNK17Q96T54 332 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 QTRT1Q9BXR0 403 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 ZDHHC8Q9ULC8 765 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 AESQ08117 197 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 LINC01590Q5TEZ4 76 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 ERASQ7Z444 233 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 MYO9BQ13459 2157 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 A0A1W2PR80 420 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 MS4A18H0YCH9 400 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 MS4A18Q3C1V0 323 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 ALKBH6Q3KRA9 238 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 C9orf40Q8IXQ3 194 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 ZNF576Q9H609 170 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 LHX9Q9NQ69 397 aa12.99□□□□□ -0.33
SMARCA4-207ENST00000541122 SMAD4Q13485 552 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 ZNF721Q8TF20 911 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 PARLQ9H300 379 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 FAM206AQ9NX38 181 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 SDK1Q7Z5N4 2213 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 SOD3P08294 240 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 TNFAIP6P98066 277 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 ZNF716A6NP11 495 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 OR52M1Q8NGK5 317 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 OR5R1Q8NH85 324 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 RNF222A6NCQ9 220 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 CDIPTO14735 213 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 PRSS12P56730 875 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 SSPNQ14714 243 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 GPR146Q96CH1 333 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 AP5S1Q9NUS5 200 aa12.98□□□□□ -0.33
SMARCA4-207ENST00000541122 UBE2CO00762 179 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 PGLYRP1O75594 196 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 MEOX1P50221 254 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 CEACAM21Q3KPI0 293 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 RBKSQ9H477 322 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 CEACAM3P40198 252 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 SLC35E4Q6ICL7 350 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 SNRNP40Q96DI7 357 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 MRPL37Q9BZE1 423 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 KIAA1217Q5T5P2 1943 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 A0A1W2PP11 408 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 HLA-DRB1P01911 266 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 BTCP35070 178 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 SELENOTP62341 195 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 TNXAQ16473 311 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 VASH2Q86V25 355 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 NDUFAF3Q9BU61 184 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 G6PC2Q9NQR9 355 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 UFC1Q9Y3C8 167 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 TRAV17A0A0B4J275 112 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 IGKV1-8A0A0C4DH67 115 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 J3QR06 171 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 FOXS1O43638 330 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 NMUP48645 174 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 ERVFRD-1P60508 538 aa12.97□□□□□ -0.33
SMARCA4-207ENST00000541122 NXPH1P58417 271 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 C2orf68Q2NKX9 166 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 SLC25A47Q6Q0C1 308 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 FLYWCH2Q96CP2 140 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 F5H697 171 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 IGHMP01871 453 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 SPSB4Q96A44 273 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 GALNT14Q96FL9 552 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 Q96M66 194 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 RASL11BQ9BPW5 248 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 PEF1Q9UBV8 284 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 COL9A1P20849 921 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 ZNF137PP52743 207 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 HERPUD1Q15011 391 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 WDR74Q6RFH5 385 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 CYP2G1PQ6ZSU1 146 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 SAXO1Q8IYX7 474 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 ZNF645Q8N7E2 425 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 OR51B2Q9Y5P1 312 aa12.96□□□□□ -0.33
SMARCA4-207ENST00000541122 TRAV9-1A0A075B6T8 112 aa12.96□□□□□ -0.34
SMARCA4-207ENST00000541122 TRAV14DV4A0A0A6YYC5 116 aa12.96□□□□□ -0.34
SMARCA4-207ENST00000541122 SRP19P09132 144 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms