RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SERPINE3A8MV23 424 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 ITGB1BP1O14713 200 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 LPLP06858 475 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 SLC2A2P11168 524 aaPredicted RBP10.45□□□□□ -0.74
LTBR-208ENST00000541005 HIST1H1DP16402 221 aaKnown RBP10.45□□□□□ -0.74
LTBR-208ENST00000541005 SDC2P34741 201 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 PPP1CCP36873 323 aaKnown RBP10.45□□□□□ -0.74
LTBR-208ENST00000541005 MOGAT2Q3SYC2 334 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 TIMM50Q3ZCQ8 353 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 Q6ZS46 218 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 C5orf24Q7Z6I8 188 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 ODF3L1Q8IXM7 274 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 Q8N6K4 173 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 OR52L2PQ8NGH6 319 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 CAPSLQ8WWF8 208 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 CMSS1Q9BQ75 279 aaKnown RBP10.45□□□□□ -0.74
LTBR-208ENST00000541005 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
LTBR-208ENST00000541005 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.45□□□□□ -0.74
LTBR-208ENST00000541005 LOC100506127A0A0U1RQW1 187 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 SMIM30A4D0T7 59 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 M0QZ24 198 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 FGF16O43320 207 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 TMEM127O75204 238 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 DIRAS3O95661 229 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 IGKV1D-33P01593 117 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 IGKV1-33P01594 117 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 TMEM11P17152 192 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 CD1BP29016 333 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 REG1BP48304 166 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 FAM71F2Q6NXP2 309 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 TGIF2LXQ8IUE1 241 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 LYG1Q8N1E2 194 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 OR2AK2Q8NG84 335 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 SETD6Q8TBK2 473 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 YIPF6Q96EC8 236 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 IFI27L2Q9H2X8 130 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 RNF167Q9H6Y7 350 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 DAPK2Q9UIK4 370 aa10.44□□□□□ -0.74
LTBR-208ENST00000541005 SCGNO76038 276 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 CD3GP09693 182 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 VDAC2P45880 294 aaPredicted RBP10.43□□□□□ -0.74
LTBR-208ENST00000541005 ARL6IP1Q15041 203 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 TMEM95Q3KNT9 176 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 Q6ZS49 121 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 ZNF833PQ6ZTB9 187 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 MOB3BQ86TA1 216 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 C5orf56Q8N8D9 126 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 LGALS14Q8TCE9 139 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 IL1F10Q8WWZ1 152 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 EAF1Q96JC9 268 aaPredicted RBP10.43□□□□□ -0.74
LTBR-208ENST00000541005 ETV7Q9Y603 341 aa10.43□□□□□ -0.74
LTBR-208ENST00000541005 NOTCH3Q9UM47 2321 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 SAA2-SAA4A0A096LPE2 208 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 TRDCB7Z8K6 153 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 FCGR3AP08637 254 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 CLEC2LP0C7M8 214 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 SAA2P0DJI9 122 aaPredicted RBP10.42□□□□□ -0.74
LTBR-208ENST00000541005 VSIG10L2P0DP72 767 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 GNB3P16520 340 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 ZBTB25P24278 435 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 LSAMPQ13449 338 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 HES1Q14469 280 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 SRSF7Q16629 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
LTBR-208ENST00000541005 C2orf68Q2NKX9 166 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 ABCA11PQ4W5N1 156 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 TREML4Q6UXN2 200 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 OR8H1Q8NGG4 311 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 OR4A4PQ8NGN8 299 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 OR2T10Q8NGZ9 312 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 AGMATQ9BSE5 352 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 CABLES2Q9BTV7 478 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 TOLLIPQ9H0E2 274 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 ATG5Q9H1Y0 275 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 GHITMQ9H3K2 345 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 SLC23A1Q9UHI7 598 aa10.42□□□□□ -0.74
LTBR-208ENST00000541005 IGHV3-72A0A0B4J1Y9 119 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 IGKV1-6A0A0C4DH72 117 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 AIREO43918 545 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 FBXO24O75426 580 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 MOSP00540 346 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 SCTP09683 121 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 SNRPBP14678 240 aaKnown RBP10.41□□□□□ -0.74
LTBR-208ENST00000541005 SERPINB10P48595 397 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 MRPS15P82914 257 aaKnown RBP10.41□□□□□ -0.74
LTBR-208ENST00000541005 MXD1Q05195 221 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 KIR2DS1Q14954 304 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 EDARADDQ8WWZ3 215 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 ZNF251Q9BRH9 671 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 MRPL20Q9BYC9 149 aaKnown RBP10.41□□□□□ -0.74
LTBR-208ENST00000541005 PARP12Q9H0J9 701 aaKnown RBP10.41□□□□□ -0.74
LTBR-208ENST00000541005 MMP27Q9H306 513 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 RHBDL2Q9NX52 303 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 PIPOXQ9P0Z9 390 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 OR1A1Q9P1Q5 309 aa10.41□□□□□ -0.74
LTBR-208ENST00000541005 TNCP24821 2201 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 ZNF736B4DX44 427 aaPredicted RBP10.4□□□□□ -0.74
LTBR-208ENST00000541005 RAB29O14966 203 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 ST8SIA5O15466 376 aa10.4□□□□□ -0.74
LTBR-208ENST00000541005 FABP7O15540 132 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms