RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 SNX29P2Q8IUI4 249 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 IZUMO1Q8IYV9 350 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 DTX3Q8N9I9 347 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 OR5AP2Q8NGF4 316 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 OR5R1Q8NH85 324 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 SSMEM1Q8WWF3 244 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 BORCS5Q969J3 196 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 ABHD14AQ9BUJ0 271 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 ANK3Q12955 4377 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 TCF21O43680 179 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 SSX5O60225 188 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 SCTP09683 121 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 NAT1P18440 290 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 ETV6P41212 452 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 OR3A3P47888 321 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 DYNLT3P51808 116 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 PDZD9Q8IXQ8 264 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 OR4P4Q8NGL7 312 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 DEDD2Q8WXF8 326 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 RPEQ96AT9 228 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF230Q9UIE0 474 aaPredicted RBP14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 ANAPC10Q9UM13 185 aa14.23□□□□□ -0.13
CLSTN3-210ENST00000540931 VGLL3A8MV65 326 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 CLDN34H7C241 214 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 RAB29O14966 203 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 BET1O15155 118 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 GAPDHP04406 335 aaKnown RBP14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 GSTT2P0CG29 244 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 GSTT2BP0CG30 244 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 GDNFP39905 211 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF137PP52743 207 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 FOXB2Q5VYV0 432 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 FAM131AQ6UXB0 335 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 Q6YL49 198 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 SMIM4Q8WVI0 70 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 S1PR3Q99500 378 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 ABCB10Q9NRK6 738 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 PTTG2Q9NZH5 202 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 PITPNC1Q9UKF7 332 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 GAB2Q9UQC2 676 aa14.22□□□□□ -0.13
CLSTN3-210ENST00000540931 IGHV3OR16-10A0A075B7F0 116 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 A0A0U1RQK1 487 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 GSTZ1O43708 216 aaPredicted RBP14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 GNG10P50151 68 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 HILS1P60008 231 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 RPL15P61313 204 aaKnown RBP14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF45Q02386 682 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 CDK10Q15131 360 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 RUSC1-AS1Q66K80 236 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 LIAT1Q6ZQX7 453 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 TMEM17Q86X19 198 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF439Q8NDP4 499 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 OR52L2PQ8NGH6 319 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 OR6Q1Q8NGQ2 317 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 ZFAND2BQ8WV99 257 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 TOMM40LQ969M1 308 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 RAB18Q9NP72 206 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNRD1Q9P1U0 126 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 MTFP1Q9UDX5 166 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF221Q9UK13 617 aa14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 ELF5Q9UKW6 265 aaPredicted RBP14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 RBM7Q9Y580 266 aaKnown RBP14.21□□□□□ -0.13
CLSTN3-210ENST00000540931 IGHV3-43A0A0B4J1X8 118 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 CSF1P09603 554 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 IGHV3-43DP0DP04 118 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 PPP1CCP36873 323 aaKnown RBP14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 AP3S2P59780 193 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 ZNF816Q0VGE8 651 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 LRRC75BQ2VPJ9 315 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 DEFB112Q30KQ8 113 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 TPTE2P1Q5T6R2 138 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 Q6ZPA2 131 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 CCDC190Q86UF4 302 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 OR10V1Q8NGI7 309 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 OR5H2Q8NGV7 314 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 S100ZQ8WXG8 99 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 GCDHQ92947 438 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 ABHD1Q96SE0 405 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 SLC6A7Q99884 636 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 SOSTQ9BQB4 213 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 RDH8Q9NYR8 311 aa14.2□□□□□ -0.14
CLSTN3-210ENST00000540931 A0A1W2PRD5 423 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 A0A1W2PRF3 423 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 A0A1W2PRM7 423 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 LY6LH3BQJ8 138 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 TRIM77I1YAP6 450 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 LANCL1O43813 399 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 OR5H8P0DN80 308 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 TAS2R19P59542 299 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 TAGLNQ01995 201 aaKnown RBP14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 BAMBIQ13145 260 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 SSX2Q16385 188 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 CNPY1Q3B7I2 92 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 IGSF11Q5DX21 431 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 CT45A1Q5HYN5 189 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 H1FOOQ8IZA3 346 aaPredicted RBP14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 CT45A3Q8NHU0 189 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms