RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 RAB12Q6IQ22 244 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 GLIPR1L1Q6UWM5 242 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 GAPTQ8N292 157 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 OR11H1Q8NG94 326 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 UFD1Q92890 307 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 DERL3Q96Q80 235 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 OR14A2Q96R54 314 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 KLK15Q9H2R5 256 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 GNB4Q9HAV0 340 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 ZNF107Q9UII5 783 aaPredicted RBP12.66□□□□□ -0.38
TRIM65-203ENST00000540812 MRPS28Q9Y2Q9 187 aaKnown RBP12.66□□□□□ -0.38
TRIM65-203ENST00000540812 A0A1W2PPK0 400 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 MLLT11Q13015 90 aaPredicted RBP12.65□□□□□ -0.38
TRIM65-203ENST00000540812 KIAA0141Q14154 515 aaPredicted RBP12.65□□□□□ -0.38
TRIM65-203ENST00000540812 GNMTQ14749 295 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 ZNF260Q3ZCT1 412 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 RITA1Q96K30 269 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 BANF2Q9H503 90 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 SPACA1Q9HBV2 294 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 ZNF580Q9UK33 172 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 PEX16Q9Y5Y5 336 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 WSB1Q9Y6I7 421 aa12.65□□□□□ -0.38
TRIM65-203ENST00000540812 G3V318 75 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 LANCL1O43813 399 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 HSMCR30P0CW71 290 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 CPEP16870 476 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 CNTFRP26992 372 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 MAP2K4P45985 399 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 GPR176Q14439 515 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 MMDQ15546 238 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 ACSM3Q53FZ2 586 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 AWAT2Q6E213 333 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 SIGIRRQ6IA17 410 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 CDH26Q8IXH8 852 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 JAGN1Q8N5M9 183 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 MGLLQ99685 303 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 MRPL20Q9BYC9 149 aaKnown RBP12.64□□□□□ -0.39
TRIM65-203ENST00000540812 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 ACOT13Q9NPJ3 140 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 OR2S2Q9NQN1 319 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 LYSTQ99698 3801 aa12.64□□□□□ -0.39
TRIM65-203ENST00000540812 UBE2QL1A1L167 161 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 SC5DO75845 299 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 OR5H8P0DN80 308 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
TRIM65-203ENST00000540812 GNB1P62873 340 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 TRAM1Q15629 374 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 TMEM30BQ3MIR4 351 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 MORN2Q502X0 79 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 ZNF367Q7RTV3 350 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 ODF3L1Q8IXM7 274 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 SVOPQ8N4V2 548 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 OR52L2PQ8NGH6 319 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 OR1N2Q8NGR9 330 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 MRPS24Q96EL2 167 aaKnown RBP12.63□□□□□ -0.39
TRIM65-203ENST00000540812 OR5B12Q96R08 314 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 ABHD14AQ9BUJ0 271 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 TMED9Q9BVK6 235 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 TAF9BQ9HBM6 251 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 RAB9BQ9NP90 201 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 ZNF256Q9Y2P7 627 aaPredicted RBP12.63□□□□□ -0.39
TRIM65-203ENST00000540812 LRRC42Q9Y546 428 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 SORL1Q92673 2214 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 STARD9Q9P2P6 4700 aa12.63□□□□□ -0.39
TRIM65-203ENST00000540812 I3L521 148 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 ATP6V0E1O15342 81 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 MAS1P04201 325 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 MGMTP16455 207 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 PSMA1P25786 263 aaKnown RBP12.62□□□□□ -0.39
TRIM65-203ENST00000540812 PPP1CCP36873 323 aaKnown RBP12.62□□□□□ -0.39
TRIM65-203ENST00000540812 ACTBP60709 375 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 STEAP3Q658P3 488 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 TRAT1Q6PIZ9 186 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 LYPD6Q86Y78 171 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 MRPL30Q8TCC3 161 aaKnown RBP12.62□□□□□ -0.39
TRIM65-203ENST00000540812 Q96M66 194 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 OR51J1Q9H342 316 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 MBNL3Q9NUK0 354 aaKnown RBP12.62□□□□□ -0.39
TRIM65-203ENST00000540812 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
TRIM65-203ENST00000540812 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 CRTAPO75718 401 aaPredicted RBP12.61□□□□□ -0.39
TRIM65-203ENST00000540812 LY86O95711 162 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 OR3A3P47888 321 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 INSL4Q14641 139 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 SPARTQ8N0X7 666 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 NKAIN3Q8N8D7 197 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 PHYHIPQ92561 330 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 UBE2E2Q96LR5 201 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 NABP2Q9BQ15 211 aa12.61□□□□□ -0.39
TRIM65-203ENST00000540812 FAM90A10PA6NDY2 464 aa12.6□□□□□ -0.39
TRIM65-203ENST00000540812 FAM90A7PA6NKC0 464 aa12.6□□□□□ -0.39
TRIM65-203ENST00000540812 FAM90A23PA8MXZ1 464 aa12.6□□□□□ -0.39
TRIM65-203ENST00000540812 CA11O75493 328 aa12.6□□□□□ -0.39
TRIM65-203ENST00000540812 HLA-DRB1P01911 266 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms