RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ZNF736B4DX44 427 aaPredicted RBP5.66□□□□□ -1.5
YBX3-209ENST00000540747 IGLV1-40P01703 118 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 GAPDHP04406 335 aaKnown RBP5.66□□□□□ -1.5
YBX3-209ENST00000540747 CPEP16870 476 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 ZNF20P17024 532 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 CD1BP29016 333 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 REG1BP48304 166 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 KCNJ3P48549 501 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 MTNR1BP49286 362 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 GNG10P50151 68 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 ETV1P50549 477 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 CCR9P51686 369 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 GNB1P62873 340 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 SCN1BQ07699 218 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 TPBGQ13641 420 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 IL13RA2Q14627 380 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 TP53I3Q53FA7 332 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 PAN3Q58A45 887 aaKnown RBP5.66□□□□□ -1.5
YBX3-209ENST00000540747 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 LIPKQ5VXJ0 399 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 FAM53AQ6NSI3 398 aaPredicted RBP5.66□□□□□ -1.5
YBX3-209ENST00000540747 ZNF529Q6P280 563 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 MZT2AQ6P582 158 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 ASCL4Q6XD76 172 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 OVCH2Q7RTZ1 564 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 AKAP14Q86UN6 197 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 ZNF491Q8N8L2 437 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 ZNF439Q8NDP4 499 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 PXT1Q8NFP0 134 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 OR11H1Q8NG94 326 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 OR10H4Q8NGA5 316 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 OR8H1Q8NGG4 311 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 OR52M1Q8NGK5 317 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 OR2T10Q8NGZ9 312 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 RFESDQ8TAC1 157 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 SETD6Q8TBK2 473 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 MRGPRDQ8TDS7 321 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 RTN4IP1Q8WWV3 396 aaPredicted RBP5.66□□□□□ -1.5
YBX3-209ENST00000540747 AP3S1Q92572 193 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 RBMXL1Q96E39 390 aaKnown RBP5.66□□□□□ -1.5
YBX3-209ENST00000540747 UBE2E2Q96LR5 201 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 KLK15Q9H2R5 256 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 IFT22Q9H7X7 185 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 TXNL4BQ9NX01 149 aaKnown RBP5.66□□□□□ -1.5
YBX3-209ENST00000540747 NDUFB11Q9NX14 153 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 ING3Q9NXR8 418 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 GNG8Q9UK08 70 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 TRAV39A0A0B4J263 110 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 TRDV1A0A1B0GX56 115 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 FABP12A6NFH5 140 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 NCBP2LA6PVI3 153 aaKnown RBP5.65□□□□□ -1.5
YBX3-209ENST00000540747 A8MZ25 164 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 HSPB6O14558 160 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 MOSP00540 346 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 OR8U8P0C7N1 319 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 SPNP16150 400 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 SDC2P34741 201 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 VEGFCP49767 419 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 F2RL1P55085 397 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 MXD1Q05195 221 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 ZNF616Q08AN1 781 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 DOC2BQ14184 412 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 KISS1Q15726 138 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 Q3ZCU0 254 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 NHLRC3Q5JS37 347 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 C22orf42Q6IC83 251 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 FAM131AQ6UXB0 335 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 MOB3BQ86TA1 216 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 LHFPL3Q86UP9 236 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 ZNF429Q86V71 674 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 GDPD1Q8N9F7 314 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 OR1N2Q8NGR9 330 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 OR10X1Q8NGY0 326 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 DCUN1D4Q92564 292 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 TMEM203Q969S6 136 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 DIRAS2Q96HU8 199 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 ZCCHC4Q9H5U6 513 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 TPSG1Q9NRR2 321 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 C19orf73Q9NVV2 129 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 ERVK13-1Q9NX77 482 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 GFOD1Q9NXC2 390 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 ADAM30Q9UKF2 790 aa5.65□□□□□ -1.5
YBX3-209ENST00000540747 EXOGQ9Y2C4 368 aaKnown RBP5.65□□□□□ -1.5
YBX3-209ENST00000540747 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.51
YBX3-209ENST00000540747 RYR1P21817 5038 aa5.65□□□□□ -1.51
YBX3-209ENST00000540747 GABRPO00591 440 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 SLC31A2O15432 143 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 SULT1B1O43704 296 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 ATP6V1G1O75348 118 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 CCNKO75909 580 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 LY86O95711 162 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 CLEC2LP0C7M8 214 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 OR5H8P0DN80 308 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 TMEM225BP0DP42 221 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 GP9P14770 177 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 VDAC1P21796 283 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 INPP1P49441 399 aa5.64□□□□□ -1.51
YBX3-209ENST00000540747 CRIP2P52943 208 aaPredicted RBP5.64□□□□□ -1.51
YBX3-209ENST00000540747 RPS25P62851 125 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms