RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 HAGHQ16775 308 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 MPV17LQ2QL34 196 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 C10orf128Q5T292 105 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM182Q6ZP80 229 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM252Q8N6L7 170 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF283Q8N7M2 679 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF321PQ8N8H1 164 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 Q8NFD4 153 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 OR10A7Q8NGE5 316 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 ITLN2Q8WWU7 325 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 FRZBQ92765 325 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 PGAM5Q96HS1 289 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 PACRGQ96M98 296 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 TECTBQ96PL2 329 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 HIST1H2BLQ99880 126 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 PSMG3Q9BT73 122 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM222Q9H0R3 208 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF286AQ9HBT8 521 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 SDF2L1Q9HCN8 221 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 ABI3Q9P2A4 366 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 B3GAT1Q9P2W7 334 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 AK3Q9UIJ7 227 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 MCTS1Q9ULC4 181 aaKnown RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 RCL1Q9Y2P8 373 aaKnown RBP6.55□□□□□ -1.36
CCDC60-204ENST00000539847 MMP24Q9Y5R2 645 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 HS3ST3B1Q9Y662 390 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 PCSK5Q92824 1860 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 DOCK10Q96BY6 2186 aa6.55□□□□□ -1.36
CCDC60-204ENST00000539847 SCN3AQ9NY46 2000 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 IGKV1D-8A0A087WSZ0 117 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 A0A087WZY1 265 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF850A8MQ14 1090 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF727A8MUV8 499 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 PPP5D1E7EU14 171 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 TCAPO15273 167 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 CYB5BO43169 146 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 TRAF3IP2O43734 574 aaPredicted RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 LY86O95711 162 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 IFNA1P01562 189 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 PFN1P07737 140 aaKnown RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 CELA3BP08861 270 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 DBHP09172 617 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 METTL15P1P0C7V9 234 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM225BP0DP42 221 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 FCGR2AP12318 317 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 COX6B1P14854 86 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 CD200P41217 278 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 GUCA1AP43080 201 aaPredicted RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 CA7P43166 264 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 KIR2DL2P43627 348 aaPredicted RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 NUTF2P61970 127 aaKnown RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 RPL23AP62750 156 aaKnown RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 VAMP2P63027 116 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 SLC10A1Q14973 349 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 DEFB110Q30KQ9 67 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 C1orf189Q5VU69 101 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 OTPQ5XKR4 325 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 BTNL3Q6UXE8 466 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 C1QL2Q7Z5L3 287 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 MRGPRGQ86SM5 289 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 TSLPQ969D9 159 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF845Q96IR2 970 aaPredicted RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 FAM71F1Q96KD3 344 aaPredicted RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 IMMP2LQ96T52 175 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 ATP5SQ99766 215 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 MRPL37Q9BZE1 423 aaKnown RBP6.54□□□□□ -1.36
CCDC60-204ENST00000539847 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 SLC2A9Q9NRM0 540 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF319Q9P2F9 582 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 POLR1DQ9Y2S0 133 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 MED13LQ71F56 2210 aa6.54□□□□□ -1.36
CCDC60-204ENST00000539847 CSMD2Q7Z408 3487 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 DCHS2Q6V1P9 2916 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 IGLV3-12A0A075B6K2 115 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 TGIF2-C20orf24A0A0A6YYL0 155 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 C3orf85A0A1B0GTC6 90 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 A0A1W2PP11 408 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 LRP5LA4QPB2 252 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 FAM24AA6NFZ4 105 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 MSTNO14793 375 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 VAMP5O95183 116 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 DIRAS3O95661 229 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 IFNA5P01569 189 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 TYMSP04818 313 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 SERPINA7P05543 415 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 CYC1P08574 325 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 GZMBP10144 247 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 NDUFB7P17568 137 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 MSR1P21757 451 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 VDAC1P21796 283 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 TNFSF10P50591 281 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 CASP6P55212 293 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 FBXW4P57775 412 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 HERV-K104P61576 105 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 RBPJQ06330 500 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 GAGE1Q13065 139 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 KIR3DS1Q14943 382 aa6.53□□□□□ -1.36
CCDC60-204ENST00000539847 ACOT6Q3I5F7 207 aaPredicted RBP6.53□□□□□ -1.36
CCDC60-204ENST00000539847 FAM90A2PQ658T7 463 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms