RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 K7N7A8 449 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 ADAM20O43506 726 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 MED6O75586 246 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 OR8U9P0C7N5 309 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 ZP3P21754 424 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 CHRNB4P30926 498 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 RAB5CP51148 216 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 RAB7AP51149 207 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 P2RX3P56373 397 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 BLOC1S1P78537 153 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 ID3Q02535 119 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 AESQ08117 197 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 LRP11Q86VZ4 500 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 OR2C3Q8N628 320 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 CD177Q8N6Q3 437 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 OR8U1Q8NH10 309 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 LHFPL5Q8TAF8 219 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 ARL11Q969Q4 196 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 MS4A5Q9H3V2 200 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 ZNF665Q9H7R5 613 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 OR2S2Q9NQN1 319 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 ASH1LQ9NR48 2969 aaKnown RBP8.52□□□□□ -1.05
SPARC-209ENST00000539687 CYTL1Q9NRR1 136 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 COA4Q9NYJ1 87 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 LPAR3Q9UBY5 353 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 GAB2Q9UQC2 676 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 RCL1Q9Y2P8 373 aaKnown RBP8.52□□□□□ -1.05
SPARC-209ENST00000539687 RTTNQ86VV8 2226 aa8.52□□□□□ -1.05
SPARC-209ENST00000539687 FREM2Q5SZK8 3169 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 IGKV1D-17A0A075B6S4 117 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 TRGV10A0A0A0MS01 117 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 TRAV38-1A0A0B4J264 116 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 RAB19A4D1S5 217 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 DPRXA6NFQ7 191 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 MSGN1A6NI15 193 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 C17orf100A8MU93 164 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 FGF16O43320 207 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 YPEL1O60688 119 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 EGR1P18146 543 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 KIR2DS2P43631 304 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 CEBPDP49716 269 aaPredicted RBP8.51□□□□□ -1.05
SPARC-209ENST00000539687 AKR1C2P52895 323 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 TMEM33P57088 247 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 RPL23AP62750 156 aaKnown RBP8.51□□□□□ -1.05
SPARC-209ENST00000539687 MSMPQ1L6U9 139 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 TOR2AQ5JU69 321 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 DRAM1Q8N682 238 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 GALNT11Q8NCW6 608 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 OR52M1Q8NGK5 317 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 OR51H1Q8NH63 302 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 OR1L1Q8NH94 360 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 MRGPRDQ8TDS7 321 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 RNASE6Q93091 150 aaKnown RBP8.51□□□□□ -1.05
SPARC-209ENST00000539687 C14orf79Q96F83 325 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 YPEL2Q96QA6 119 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 GCM1Q9NP62 436 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 LYRM2Q9NU23 88 aaPredicted RBP8.51□□□□□ -1.05
SPARC-209ENST00000539687 FBXL17Q9UF56 701 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 SH3BGRL2Q9UJC5 107 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 PPP1R3CQ9UQK1 317 aa8.51□□□□□ -1.05
SPARC-209ENST00000539687 IGHV3-64DA0A0J9YX35 117 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 C15orf65H3BRN8 121 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 F2RL2O00254 374 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 SHOXO15266 292 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 TNFSF12O43508 249 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 PITX3O75364 302 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 DFFBO76075 338 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 CD3EP07766 207 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 FGF2P09038 288 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 OR4A8P0C604 315 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 SEC11BP0C7V7 166 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 GLIPR1P48060 266 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 TAS2R30P59541 319 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 BSPH1Q075Z2 132 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 EDDM3AQ14507 147 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 EFNB3Q15768 340 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 ADIPOQQ15848 244 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 SWI5Q1ZZU3 235 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 NCMAPQ5T1S8 102 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 STUMQ69YW2 141 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 IL34Q6ZMJ4 242 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 STX12Q86Y82 276 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 STPG2Q8N412 459 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.5□□□□□ -1.05
SPARC-209ENST00000539687 OR10A7Q8NGE5 316 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 RAB39BQ96DA2 213 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 OR2D2Q9H210 308 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 ARV1Q9H2C2 271 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 GNG12Q9UBI6 72 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 NUP50Q9UKX7 468 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 MMP24Q9Y5R2 645 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 WSB1Q9Y6I7 421 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 GTF3C1Q12789 2109 aa8.5□□□□□ -1.05
SPARC-209ENST00000539687 ZNF729A6NN14 1252 aaPredicted RBP8.49□□□□□ -1.05
SPARC-209ENST00000539687 CYSRT1A8MQ03 144 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 A8MXK9 166 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 B9A039 149 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 LGALS8O00214 317 aa8.49□□□□□ -1.05
SPARC-209ENST00000539687 NDUFA2O43678 99 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms