RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 TINAGL1Q9GZM7 467 aaPredicted RBP10.57□□□□□ -0.72
CCDC42-202ENST00000539522 MMP28Q9H239 520 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 Q9N2K0 584 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 OR6C3Q9NZP0 311 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 ANXA10Q9UJ72 324 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 CDC42EP3Q9UKI2 254 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 MGAT4AQ9UM21 535 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 IGHV1-69DA0A0B4J2H0 117 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 A0A1B0GVG6 124 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 A0A1W2PPH5 198 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 F2RL2O00254 374 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 IGHV1-69P01742 117 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 AMY2AP04746 511 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 CTXN2P0C2S0 81 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 HRH1P35367 487 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 CCR6P51684 374 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 RAG2P55895 527 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 GNMTQ14749 295 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 HERPUD1Q15011 391 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 CDK10Q15131 360 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 C9orf139Q6ZV77 190 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 DYNAPQ8N1N2 210 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 ARRDC1Q8N5I2 433 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 OR11H6Q8NGC7 330 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 OR51S1Q8NGJ8 323 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 OR56B4Q8NH76 319 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 NANPQ8TBE9 248 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 MAFIPQ8WZ33 124 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 SLC6A7Q99884 636 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 SLC25A21Q9BQT8 299 aaPredicted RBP10.56□□□□□ -0.72
CCDC42-202ENST00000539522 SUCNR1Q9BXA5 334 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 TMEM133Q9H2Q1 129 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 TAF9BQ9HBM6 251 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 SLC2A8Q9NY64 477 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 IDI2-AS1Q9NZ38 188 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 NUP50Q9UKX7 468 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 TRAPPC2LQ9UL33 140 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 SESN1Q9Y6P5 492 aa10.56□□□□□ -0.72
CCDC42-202ENST00000539522 IGHV2-26A0A0B4J1V2 119 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 TRDCB7Z8K6 153 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 INMT-MINDY4F8WBC2 141 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 NDUFB6O95139 128 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 DHFRP00374 187 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 IGLV1-47P01700 117 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 IGHV3-7P01780 117 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 HBZP02008 142 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 SCTP09683 121 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 H2AFB2P0C5Z0 115 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 COX7A1P24310 79 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 CD34P28906 385 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 KIR2DS4P43632 304 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 UBE2E1P51965 193 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF134P52741 427 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 ARPC4P59998 168 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 TSPAN5P62079 268 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 KIR2DS1Q14954 304 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 RBMS2Q15434 407 aaKnown RBP10.55□□□□□ -0.72
CCDC42-202ENST00000539522 LTC4SQ16873 150 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 C6orf183Q5T699 404 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF626Q68DY1 528 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 FAAP20Q6NZ36 180 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 TRAT1Q6PIZ9 186 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 DHRS11Q6UWP2 260 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 MOB1BQ7L9L4 216 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 OVCH2Q7RTZ1 564 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 LHFPL4Q7Z7J7 247 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 PRIMA1Q86XR5 153 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF565Q8N9K5 539 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF439Q8NDP4 499 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 TERB2Q8NHR7 220 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 ARL11Q969Q4 196 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 BEX2Q9BXY8 128 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 PARP12Q9H0J9 701 aaKnown RBP10.55□□□□□ -0.72
CCDC42-202ENST00000539522 GAL3ST2Q9H3Q3 398 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 NECAP2Q9NVZ3 263 aa10.55□□□□□ -0.72
CCDC42-202ENST00000539522 NAV3Q8IVL0 2385 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 IGHV3-43A0A0B4J1X8 118 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 A0A0U1RQK1 487 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 SLC31A2O15432 143 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 FAM157CP0CG43 387 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 IGHV3-43DP0DP04 118 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 GZMHP20718 246 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 EPHA1P21709 976 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 IDO2Q6ZQW0 420 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF554Q86TJ5 538 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 OR52L2PQ8NGH6 319 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 OR4P4Q8NGL7 312 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 SCGB3A2Q96PL1 93 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 KCNIP1Q9NZI2 227 aa10.54□□□□□ -0.72
CCDC42-202ENST00000539522 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
CCDC42-202ENST00000539522 A0A1W2PPE3 182 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 NPFFO15130 113 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 GSTT2P0CG29 244 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 OR5H8P0DN80 308 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 SRD5A1P18405 259 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 FPR2P25090 351 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 SAA4P35542 130 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms