RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 GMPPAQ96IJ6 420 aaPredicted RBP12.57□□□□□ -0.4
CACNB1-206ENST00000539338 B4DEV8 164 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 SPCS3P61009 180 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 COL10A1Q03692 680 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 EGR4Q05215 589 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 CEBPEQ15744 281 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 ADAMTS17Q8TE56 1095 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 TMEM204Q9BSN7 226 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 CLEC5AQ9NY25 188 aa12.57□□□□□ -0.4
CACNB1-206ENST00000539338 OR10C1Q96KK4 312 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 G6PC2Q9NQR9 355 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 ELOA3CA0A087WX78 387 aaPredicted RBP12.56□□□□□ -0.4
CACNB1-206ENST00000539338 TCAPO15273 167 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 CSN3P07498 182 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 SMIM17P0DL12 118 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 MDKP21741 143 aaPredicted RBP12.56□□□□□ -0.4
CACNB1-206ENST00000539338 SULT1A2P50226 295 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 SYNGR1O43759 233 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 NEURL1O76050 574 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 WDR73Q6P4I2 378 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 CYB561D1Q8N8Q1 229 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 RSG1Q9BU20 258 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 TMEM210A6NLX4 147 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 ZNF253O75346 499 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 FGF12P61328 243 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 MRPL54Q6P161 138 aaKnown RBP12.56□□□□□ -0.4
CACNB1-206ENST00000539338 OVCH2Q7RTZ1 564 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 TMEM251Q8N6I4 163 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 TMEM252Q8N6L7 170 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 HARBI1Q96MB7 349 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 ZNF665Q9H7R5 613 aa12.56□□□□□ -0.4
CACNB1-206ENST00000539338 SPTA1P02549 2419 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 USF1P22415 310 aaPredicted RBP12.55□□□□□ -0.4
CACNB1-206ENST00000539338 TEX30Q5JUR7 227 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 PUSL1Q8N0Z8 303 aaKnown RBP12.55□□□□□ -0.4
CACNB1-206ENST00000539338 NHLRC2Q8NBF2 726 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
CACNB1-206ENST00000539338 AMMECR1Q9Y4X0 333 aaPredicted RBP12.55□□□□□ -0.4
CACNB1-206ENST00000539338 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 CTXND1A0A1B0GTU2 59 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 ZBTB34Q8NCN2 500 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 OR5AL1P0C617 328 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 NPY1RP25929 384 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 REG1BP48304 166 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 SCARF2Q96GP6 870 aaPredicted RBP12.55□□□□□ -0.4
CACNB1-206ENST00000539338 SFXN3Q9BWM7 321 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
CACNB1-206ENST00000539338 SVILO95425 2214 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 FAM74A7A6NL05 159 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 FAM74A3Q4VXF1 159 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 CXorf66Q5JRM2 361 aaPredicted RBP12.54□□□□□ -0.4
CACNB1-206ENST00000539338 TGIF2LYQ8IUE0 185 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 OR1L6Q8NGR2 347 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 RNF115Q9Y4L5 304 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 ABHD14BQ96IU4 210 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 ZMAT5Q9UDW3 170 aaKnown RBP12.54□□□□□ -0.4
CACNB1-206ENST00000539338 NAGKQ9UJ70 344 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 HS3ST3B1Q9Y662 390 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 SCN10AQ9Y5Y9 1956 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 LOC101059948A0A1B0GTJ6 334 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 SRSF10O75494 262 aaKnown RBP12.54□□□□□ -0.4
CACNB1-206ENST00000539338 IFI6P09912 130 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 PRDX2P32119 198 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 TMEM222Q9H0R3 208 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 MIOXQ9UGB7 285 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 PRNDQ9UKY0 176 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 RNF24Q9Y225 148 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 MFSD2BA6NFX1 497 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 KLF4O43474 513 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 HKR1P10072 659 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 TBR1Q16650 682 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 TCTEX1D1Q8N7M0 179 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 OR4X1Q8NH49 305 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 FLYWCH2Q96CP2 140 aaKnown RBP12.54□□□□□ -0.4
CACNB1-206ENST00000539338 C5orf66Q9H5L9 145 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
CACNB1-206ENST00000539338 CD59P13987 128 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 ZNF826PQ6ZT77 177 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 RNF2Q99496 336 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 THYN1Q9P016 225 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 WIPI2Q9Y4P8 454 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 BMPR1BO00238 502 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 P2RY6Q15077 328 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 KHDC3LQ587J8 217 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 PRSS33Q8NF86 280 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 A0A087X0M5 115 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 IGHV3-21A0A0B4J1V1 117 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 A0A1B0GX30 115 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 HELTA6NFD8 242 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 GOSR1O95249 250 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 MMP9P14780 707 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 IGLV3-21P80748 117 aaPredicted RBP12.53□□□□□ -0.4
CACNB1-206ENST00000539338 HLA-DRB5Q30154 266 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 AICDAQ9GZX7 198 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 M0R2Z0 102 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 PDE6DO43924 150 aa12.53□□□□□ -0.4
CACNB1-206ENST00000539338 OR2H2O95918 312 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms