RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 BEX2Q9BXY8 128 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 BEX1Q9HBH7 125 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 C14orf166Q9Y224 244 aaKnown RBP11.62□□□□□ -0.55
CD4-208ENST00000538827 ATRQ13535 2644 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 FN1P02751 2386 aaKnown RBP11.61□□□□□ -0.55
CD4-208ENST00000538827 IGHV2-70DA0A0C4DH43 119 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 VGLL3A8MV65 326 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 ST8SIA5O15466 376 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 PI3P19957 117 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 ECI1P42126 302 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 LUMP51884 338 aaPredicted RBP11.61□□□□□ -0.55
CD4-208ENST00000538827 DLX6P56179 175 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 AADACL3Q5VUY0 350 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 ZNF660Q6AZW8 331 aaPredicted RBP11.61□□□□□ -0.55
CD4-208ENST00000538827 KRTAP1-3Q8IUG1 177 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 MAPK1IP1LQ8NDC0 245 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 LY6G5BQ8NDX9 201 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 GIMAP1Q8WWP7 306 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 MRGPRFQ96AM1 343 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 SLC25A21Q9BQT8 299 aaPredicted RBP11.61□□□□□ -0.55
CD4-208ENST00000538827 SLC5A7Q9GZV3 580 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 VSIG4Q9Y279 399 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 OR2W1Q9Y3N9 320 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 SESN1Q9Y6P5 492 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 VPS13CQ709C8 3753 aa11.61□□□□□ -0.55
CD4-208ENST00000538827 CR1P17927 2039 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 IGKV1D-13A0A0B4J2D9 117 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 hCG_1809904A0A1W2PP81 198 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 A0A1W2PPE2 198 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 A0A1W2PPE3 182 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 A0A1W2PR64 198 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 A0A1W2PRV1 198 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 HSD17B6O14756 317 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 TUSC2O75896 110 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 IGHV1-8P0DP01 117 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 IGKV1-13P0DP09 117 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 COX7A1P24310 79 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 DLX1P56177 255 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 ARF6P62330 175 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 PRB3Q04118 309 aaPredicted RBP11.6□□□□□ -0.55
CD4-208ENST00000538827 ABCA11PQ4W5N1 156 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 DHRS11Q6UWP2 260 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 PRSS57Q6UWY2 283 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 HEPN1Q6WQI6 88 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 ZDHHC22Q8N966 263 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 DUSP18Q8NEJ0 188 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 OR2AK2Q8NG84 335 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 OR10A7Q8NGE5 316 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 EDARADDQ8WWZ3 215 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 C18orf12Q96KH6 178 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 SCGB3A2Q96PL1 93 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 OR2D2Q9H210 308 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 SIRT7Q9NRC8 400 aa11.6□□□□□ -0.55
CD4-208ENST00000538827 C17orf98A8MV24 154 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 INMT-MINDY4F8WBC2 141 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 SLC31A2O15432 143 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 YPEL1O60688 119 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 ANXA7P20073 488 aaKnown RBP11.59□□□□□ -0.55
CD4-208ENST00000538827 LOXL3P58215 753 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 MORN2Q502X0 79 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 PHLDA2Q53GA4 152 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 UTF1Q5T230 341 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 CLEC9AQ6UXN8 241 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 Q71RC1 249 aaPredicted RBP11.59□□□□□ -0.55
CD4-208ENST00000538827 SLC38A6Q8IZM9 456 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 KIR3DL3Q8N743 410 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 OR52M1Q8NGK5 317 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 OR8U1Q8NH10 309 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 ZFAND1Q8TCF1 268 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 YPEL2Q96QA6 119 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
CD4-208ENST00000538827 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
CD4-208ENST00000538827 A0A096LNT2 108 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 M0R1W7 72 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 MSMBP08118 114 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 DVL1P1P54792 670 aaPredicted RBP11.58□□□□□ -0.56
CD4-208ENST00000538827 SURF2Q15527 256 aaPredicted RBP11.58□□□□□ -0.56
CD4-208ENST00000538827 METTL11BQ5VVY1 283 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 PCGF1Q9BSM1 259 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 TMEM133Q9H2Q1 129 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 LINC00574Q9H8X3 128 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 MMP26Q9NRE1 261 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 CCL28Q9NRJ3 127 aa11.58□□□□□ -0.56
CD4-208ENST00000538827 PEX14O75381 377 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 DHFRP00374 187 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 RBP4P02753 201 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 CTSDP07339 412 aaPredicted RBP11.57□□□□□ -0.56
CD4-208ENST00000538827 AKR1C4P17516 323 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 GPR12P47775 334 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 TAS2R31P59538 309 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 LOXL1Q08397 574 aaPredicted RBP11.57□□□□□ -0.56
CD4-208ENST00000538827 KLRD1Q13241 179 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms