RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
ATL3-203ENST00000538786 OR2D2Q9H210 308 aa12.35□□□□□ -0.43
ATL3-203ENST00000538786 FBXL17Q9UF56 701 aa12.35□□□□□ -0.43
ATL3-203ENST00000538786 BSNQ9UPA5 3926 aa12.35□□□□□ -0.43
ATL3-203ENST00000538786 MAP1BP46821 2468 aaKnown RBP12.34□□□□□ -0.43
ATL3-203ENST00000538786 CHD8Q9HCK8 2581 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 A0A1B0GU03 582 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 GAPDHP04406 335 aaKnown RBP12.34□□□□□ -0.43
ATL3-203ENST00000538786 MUC1P15941 1255 aaPredicted RBP12.34□□□□□ -0.43
ATL3-203ENST00000538786 PVALBP20472 110 aaPredicted RBP12.34□□□□□ -0.43
ATL3-203ENST00000538786 CCL8P80075 99 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 ID3Q02535 119 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 RPL7L1Q6DKI1 246 aaKnown RBP12.34□□□□□ -0.43
ATL3-203ENST00000538786 RFESDQ8TAC1 157 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 LSM10Q969L4 123 aaKnown RBP12.34□□□□□ -0.43
ATL3-203ENST00000538786 REG4Q9BYZ8 158 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 SDHAF2Q9NX18 166 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 RNF150Q9ULK6 438 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 CADP27708 2225 aa12.34□□□□□ -0.43
ATL3-203ENST00000538786 SHISA9B4DS77 424 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 JTBO76095 146 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 IGKV1-39P01597 117 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 IGKV1D-39P04432 117 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 ZNF16P17020 682 aaPredicted RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 EIF4EBP1Q13541 118 aaPredicted RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 ZNF585BQ52M93 769 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 CXorf66Q5JRM2 361 aaPredicted RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 FAM209AQ5JX71 171 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 TEX36Q5VZQ5 186 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 FAM53AQ6NSI3 398 aaPredicted RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 GPR146Q96CH1 333 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 OR6C3Q9NZP0 311 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 LRRC30A6NM36 301 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 EDDM3BP56851 147 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 POLR2GP62487 172 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATL3-203ENST00000538786 TLE1Q04724 770 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 DMRTC2Q8IXT2 367 aaPredicted RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 FAM216AQ8WUB2 273 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 C17orf50Q8WW18 174 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 ZCCHC14Q8WYQ9 949 aaKnown RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 RNASE6Q93091 150 aaKnown RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 EGLN1Q9GZT9 426 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 FAM234AQ9H0X4 552 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 BARX1Q9HBU1 254 aaPredicted RBP12.33□□□□□ -0.44
ATL3-203ENST00000538786 JPT1Q9UK76 154 aa12.33□□□□□ -0.44
ATL3-203ENST00000538786 TLN1Q9Y490 2541 aaKnown RBP12.32□□□□□ -0.44
ATL3-203ENST00000538786 IGHV3-43A0A0B4J1X8 118 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 MEX3AA1L020 520 aaKnown RBP12.32□□□□□ -0.44
ATL3-203ENST00000538786 I3L521 148 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 FGF16O43320 207 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 PITX3O75364 302 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 IGHV3-43DP0DP04 118 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 SFTPCP11686 197 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 MMP9P14780 707 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 EIF5AL1Q6IS14 154 aaKnown RBP12.32□□□□□ -0.44
ATL3-203ENST00000538786 UNQ6494/PRO21346Q6UXR6 183 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 RNASE11Q8TAA1 199 aaKnown RBP12.32□□□□□ -0.44
ATL3-203ENST00000538786 RNF141Q8WVD5 230 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 EDARADDQ8WWZ3 215 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 C5orf30Q96GV9 206 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 GAFA1Q96PS6 74 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 PRORYQ9H606 182 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 ZNF665Q9H7R5 613 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 COQ3Q9NZJ6 369 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 NDRG3Q9UGV2 375 aa12.32□□□□□ -0.44
ATL3-203ENST00000538786 CHD3Q12873 2000 aaKnown RBP12.32□□□□□ -0.44
ATL3-203ENST00000538786 FAM90A27PA6NNH2 459 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 E7EQL1 145 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 F2RL2O00254 374 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 CATR1Q13166 79 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
ATL3-203ENST00000538786 UBAC2Q8NBM4 344 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 DEFB108BQ8NET1 73 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 AGMATQ9BSE5 352 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 SMIM3Q9BZL3 60 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 MAGT1Q9H0U3 335 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 GNG12Q9UBI6 72 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 SSSCA1O60232 199 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 YPEL1O60688 119 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 IGKV1-5P01602 117 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 CD3EP07766 207 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 CGB3P0DN86 165 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 CGB7P0DN87 165 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 SELLP14151 372 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 EPHA1P21709 976 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 AKR1C2P52895 323 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 VAMP2P63027 116 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 TGIF2LYQ8IUE0 185 aa12.31□□□□□ -0.44
ATL3-203ENST00000538786 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
ATL3-203ENST00000538786 ZNF808Q8N4W9 903 aaPredicted RBP12.31□□□□□ -0.44
ATL3-203ENST00000538786 EIF4E3Q8N5X7 224 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms